| Sparse and compositionally robust inference of microbial ecological networks ZD Kurtz, CL Müller, ER Miraldi, DR Littman, MJ Blaser, RA Bonneau PLoS computational biology 11 (5), e1004226, 2015 | 296 | 2015 |
| Alternatively activated macrophages derived from monocytes and tissue macrophages are phenotypically and functionally distinct UM Gundra, NM Girgis, D Ruckerl, S Jenkins, LN Ward, ZD Kurtz, ... Blood 123 (20), e110-e122, 2014 | 191 | 2014 |
| Helminth infection promotes colonization resistance via type 2 immunity D Ramanan, R Bowcutt, SC Lee, M San Tang, ZD Kurtz, Y Ding, K Honda, ... Science 352 (6285), 608-612, 2016 | 190 | 2016 |
| Helminth Colonization Is Associated with Increased Diversity of the Gut Microbiota SC Lee, MS Tang, YAL Lim, SH Choy, ZD Kurtz, LM Cox, UM Gundra, ... PLoS Neglected Tropical Diseases 8 (5), e2880, 2014 | 176 | 2014 |
| Antibiotic perturbation of the murine gut microbiome enhances the adiposity, insulin resistance, and liver disease associated with high-fat diet D Mahana, CM Trent, ZD Kurtz, NA Bokulich, T Battaglia, J Chung, ... Genome medicine 8 (1), 48, 2016 | 79 | 2016 |
| Roles of putative type II secretion and type IV pilus systems in the virulence of uropathogenic Escherichia coli R Kulkarni, BK Dhakal, ES Slechta, Z Kurtz, MA Mulvey, DG Thanassi PLoS One 4 (3), e4752, 2009 | 68 | 2009 |
| A single early-in-life macrolide course has lasting effects on murine microbial network topology and immunity VE Ruiz, T Battaglia, ZD Kurtz, L Bijnens, A Ou, I Engstrand, X Zheng, ... Nature communications 8 (1), 518, 2017 | 32 | 2017 |
| Fungi stabilize connectivity in the lung and skin microbial ecosystems L Tipton, CL Müller, ZD Kurtz, L Huang, E Kleerup, A Morris, R Bonneau, ... Microbiome 6 (1), 12, 2018 | 23 | 2018 |
| Oxalobacter formigenes-associated host features and microbial community structures examined using the American Gut Project M Liu, H Koh, ZD Kurtz, T Battaglia, A PeBenito, H Li, L Nazzal, MJ Blaser Microbiome 5 (1), 108, 2017 | 19 | 2017 |
| Lung microbiome and host immune tone in subjects with idiopathic pulmonary fibrosis treated with inhaled interferon-γ J Wang, M Lesko, MH Badri, BC Kapoor, BG Wu, Y Li, GC Smaldone, ... ERJ Open Research 3 (3), 00008-2017, 2017 | 14 | 2017 |
| Generalized stability approach for regularized graphical models CL Müller, R Bonneau, Z Kurtz arXiv preprint arXiv:1605.07072, 2016 | 4 | 2016 |
| Normalization methods for microbial abundance data strongly affect correlation estimates M Badri, Z Kurtz, C Muller, R Bonneau bioRxiv, 406264, 2018 | 1 | 2018 |
| Lower Airway Microbiota Is Associated With Persistent Inflammation In The Lower Airways During Anti-Inflammatory Therapy With Inhaled Interferon-Gamma MB Lesko, J Wang, MH Badri, B Kapoor, Y Li, GC Smaldone, Z Kurtz, ... B21. ALTERATIONS IN MICROBIOME AND VIROME IN LUNG DISEASE, A2933-A2933, 2017 | | 2017 |
| pulsar v0.3.4 Z Kurtz | | |
| Sparse distance metric learning for embedding compositional data ZD Kurtz | | |
Richard BonneauNew York UniversityVerified email at nyu.edu
