| A global reference for human genetic variation 1000 Genomes Project Consortium Nature 526 (7571), 68, 2015 | 4767 | 2015 |
| ABySS: a parallel assembler for short read sequence data JT Simpson, K Wong, SD Jackman, JE Schein, SJM Jones, I Birol Genome research 19 (6), 1117-1123, 2009 | 3035 | 2009 |
| Complex landscapes of somatic rearrangement in human breast cancer genomes PJ Stephens, DJ McBride, ML Lin, I Varela, ED Pleasance, JT Simpson, ... Nature 462 (7276), 1005-1010, 2009 | 834 | 2009 |
| Efficient de novo assembly of large genomes using compressed data structures JT Simpson, R Durbin Genome research 22 (3), 549-556, 2012 | 685 | 2012 |
| Real-time, portable genome sequencing for Ebola surveillance J Quick, NJ Loman, S Duraffour, JT Simpson, E Severi, L Cowley, JA Bore, ... Nature 530 (7589), 228, 2016 | 609 | 2016 |
| Insights into hominid evolution from the gorilla genome sequence A Scally, JY Dutheil, LDW Hillier, GE Jordan, I Goodhead, J Herrero, ... Nature 483 (7388), 169, 2012 | 600 | 2012 |
| Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... GigaScience 2 (1), 10, 2013 | 535 | 2013 |
| Nanopore sequencing and assembly of a human genome with ultra-long reads M Jain, S Koren, KH Miga, J Quick, AC Rand, TA Sasani, JR Tyson, ... Nature biotechnology 36 (4), 338, 2018 | 510 | 2018 |
| Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 496 | 2011 |
| A complete bacterial genome assembled de novo using only nanopore sequencing data NJ Loman, J Quick, JT Simpson Nature methods 12 (8), 733, 2015 | 490 | 2015 |
| Trait variation in yeast is defined by population history J Warringer, E Zörgö, FA Cubillos, A Zia, A Gjuvsland, JT Simpson, ... PLoS genetics 7 (6), e1002111, 2011 | 259 | 2011 |
| Efficient construction of an assembly string graph using the FM-index JT Simpson, R Durbin Bioinformatics 26 (12), i367-i373, 2010 | 257 | 2010 |
| Establishment and cryptic transmission of Zika virus in Brazil and the Americas NR Faria, J Quick, IM Claro, J Theze, JG de Jesus, M Giovanetti, ... Nature 546 (7658), 406, 2017 | 253 | 2017 |
| Shotgun metagenomics, from sampling to analysis C Quince, AW Walker, JT Simpson, NJ Loman, N Segata Nature biotechnology 35 (9), 833, 2017 | 243 | 2017 |
| A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns F Notta, M Chan-Seng-Yue, M Lemire, Y Li, GW Wilson, AA Connor, ... Nature 538 (7625), 378, 2016 | 220 | 2016 |
| Revealing the genetic structure of a trait by sequencing a population under selection L Parts, FA Cubillos, J Warringer, K Jain, F Salinas, SJ Bumpstead, ... Genome research 21 (7), 1131-1138, 2011 | 219 | 2011 |
| Detecting DNA cytosine methylation using nanopore sequencing JT Simpson, RE Workman, PC Zuzarte, M David, LJ Dursi, W Timp Nature Methods 14 (4), 407, 2017 | 208 | 2017 |
| A high-definition view of functional genetic variation from natural yeast genomes A Bergström, JT Simpson, F Salinas, B Barré, L Parts, A Zia, ... Molecular biology and evolution 31 (4), 872-888, 2014 | 207 | 2014 |
| The khmer software package: enabling efficient nucleotide sequence analysis MR Crusoe, HF Alameldin, S Awad, E Boucher, A Caldwell, R Cartwright, ... F1000Research 4, 2015 | 195* | 2015 |
| MinION Analysis and Reference Consortium: Phase 1 data release and analysis CLC Ip, M Loose, JR Tyson, M de Cesare, BL Brown, M Jain, RM Leggett, ... F1000Research 4, 2015 | 184 | 2015 |
Richard DurbinDept of Genetics, University of CambridgeVerified email at cam.ac.uk
