| MEGAN community edition-interactive exploration and analysis of large-scale microbiome sequencing data DH Huson, S Beier, I Flade, A Górska, M El-Hadidi, S Mitra, ... PLoS computational biology 12 (6), e1004957, 2016 | 489 | 2016 |
| Soil biochar amendment shapes the composition of N2O-reducing microbial communities J Harter, P Weigold, M El-Hadidi, DH Huson, A Kappler, S Behrens Science of the Total Environment 562, 379-390, 2016 | 63 | 2016 |
| Antibiotic selection pressure determination through sequence-based metagenomics M Willmann, M El-Hadidi, DH Huson, M Schütz, C Weidenmaier, ... Antimicrobial agents and chemotherapy 59 (12), 7335-7345, 2015 | 40 | 2015 |
| A metagenomic-based survey of microbial (de) halogenation potential in a German forest soil P Weigold, M El-Hadidi, A Ruecker, DH Huson, T Scholten, M Jochmann, ... Scientific reports 6, 28958, 2016 | 20 | 2016 |
| Soil biochar amendment affects the diversity of nosZ transcripts: implications for N 2 O formation J Harter, M El-Hadidi, DH Huson, A Kappler, S Behrens Scientific reports 7 (1), 3338, 2017 | 19 | 2017 |
| Biochar affects community composition of nitrous oxide reducers in a field experiment HM Krause, R Hüppi, J Leifeld, M El-Hadidi, J Harter, A Kappler, ... Soil Biology and Biochemistry 119, 143-151, 2018 | 15 | 2018 |
| Human salivary amylase gene copy number impacts oral and gut microbiomes AC Poole, JK Goodrich, ND Youngblut, GG Luque, A Ruaud, JL Sutter, ... Cell host & microbe 25 (4), 553-564. e7, 2019 | 8 | 2019 |
| Improved metagenome analysis using MEGAN5 M El Hadidi, HJ Ruscheweyh, D Huson InJoint 21st annual international conference on intelligent systems for …, 2013 | 7 | 2013 |
| A simple statistical test of taxonomic or functional homogeneity using replicated microbiome sequencing samples DH Huson, M Steel, M El-Hadidi, S Mitra, S Peter, M Willmann Journal of biotechnology 250, 45-50, 2017 | 1 | 2017 |
| Role of TGF-β1 and C-Kit Mutations in the Development of Hepatocellular Carcinoma in Hepatitis C Virus-Infected Patients: in vitro Study ME El-Houseini, A Ismail, AA Abdelaal, AH El-Habashy, ZF Abdallah, ... Biochemistry (Moscow) 84 (8), 941-953, 2019 | | 2019 |
| A Hybrid Machine Learning Approach for the Phenotypic Classification of Metagenomic Colon Cancer Reads Based on Kmer Frequency and Biomarker Profiling A Kishk, A Elzizy, D Galal, EA Razek, E Fawzy, G Ahmed, M Gawish, ... 2018 9th Cairo International Biomedical Engineering Conference (CIBEC), 118-121, 2018 | | 2018 |
| MetaFlow: an interactive user-friendly workflow for automated analysis of whole genome shotgun sequencing metagenomic data U Bakry, M Fares, A Kishk, M El-Hadidi 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | | 2018 |
| AmpliconNet: Sequence Based Multi-layer Perceptron for Amplicon Read Classification Using Real-time Data Augmentation A Kishk, M El-Hadidi 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2018 | | 2018 |
| SpeciesMLP: Sequence based Multi-layer Perceptron for Amplicon Read Classification Using Real-time Data Augmentation A Kishk, M El-Hadidi bioRxiv, 419846, 2018 | | 2018 |
| Enriched environmental conditions modify the gut microbiome composition and fecal markers of inflammation in Parkinson’s disease ORNC Yogesh Singh, Mohammed E. Hadidi, Jakob Matthes, Zinah Wassouf, Julia ... Front. Neurosci., 0 | | |
