Thomas L. Madden - Google Scholar Citations

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Citations	97869	34567
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Co-authors

Alejandro SchafferComputer Scientist, National Institutes of HealthVerified email at helix.nih.gov
Stephen AltschulNCBI NLM NIHVerified email at nih.gov
Jinghui ZhangSt Jude Children's Research HospitalVerified email at stjude.org
Christiam CamachoNational Center for Biotechnology Information, NLM, NIHVerified email at nih.gov
Lynn SchrimlAssistant Professor, Department of Epidemiology and Public Health, Institute for Genome Sciences, University of Maryland School Verified email at som.umaryland.edu
Gregory SchulerNational Institutes of HealthVerified email at ncbi.nlm.nih.gov
Eugene KooninSenior Investigator, NCBI, NIHVerified email at ncbi.nlm.nih.gov
John L SpougeSenior Investigator, National Institutes of HealthVerified email at nih.gov
Steven G. RozenDuke-NUS Medical School SingaporeVerified email at duke-nus.edu.sg
Ioana CutcutachePrincipal Scientist, UCB PharmaVerified email at ucb.com
Judith HerzfeldProfessor of Biophysical Chemistry, Brandeis UniversityVerified email at brandeis.edu
Aravind LSenior Investigator, National Institutes of HealthVerified email at mail.nih.gov
Eric W. SayersNational Center for Biotechnology Information, NLM, NIHVerified email at ncbi.nlm.nih.gov
Tuğba Önal-SüzekAssistant Professor, Department of Computer Engineering, Muğla Sıtkı Kocman University, MuğlaVerified email at mu.edu.tr
Ron EdgarSimons FoundationVerified email at mail.nih.gov
Webb MillerPenn State University, UC Santa Barbara, ArizonaVerified email at bx.psu.edu
Tracey RouaultNational Institutes of Child Health and Human DevelopmentVerified email at mail.nih.gov
Victor R. GordeukUniversity of Illinois at ChicagoVerified email at uic.edu
Ben BusbyNCBI/NLM/NIHVerified email at nih.gov
Tyra WolfsbergNIH/NHGRIVerified email at nhgri.nih.gov

Thomas L. Madden

Staff Scientist, NCBI, NLM, NIH

Verified email at ncbi.nlm.nih.gov - Homepage

Bioinformatics Sequence Alignment


Title	Cited by	Year
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs SF Altschul, TL Madden, AA Schäffer, J Zhang, Z Zhang, W Miller, ... Nucleic acids research 25 (17), 3389-3402, 1997	71921	1997
BLAST+: architecture and applications C Camacho, G Coulouris, V Avagyan, N Ma, J Papadopoulos, K Bealer, ... BMC bioinformatics 10 (1), 421, 2009	6245	2009
Primer-BLAST: a tool to design target-specific primers for polymerase chain reaction J Ye, G Coulouris, I Zaretskaya, I Cutcutache, S Rozen, TL Madden BMC bioinformatics 13 (1), 134, 2012	2569	2012
BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences TA Tatusova, TL Madden FEMS microbiology letters 174 (2), 247-250, 1999	2166	1999
NCBI BLAST: a better web interface M Johnson, I Zaretskaya, Y Raytselis, Y Merezhuk, S McGinnis, ... Nucleic acids research 36 (suppl_2), W5-W9, 2008	1608	2008
Database resources of the national center for biotechnology information DL Wheeler, T Barrett, DA Benson, SH Bryant, K Canese, V Chetvernin, ... Nucleic acids research 35 (suppl_1), D5-D12, 2006	1498	2006
Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements AA Schäffer, L Aravind, TL Madden, S Shavirin, JL Spouge, YI Wolf, ... Nucleic acids research 29 (14), 2994-3005, 2001	1360	2001
BLAST: at the core of a powerful and diverse set of sequence analysis tools S McGinnis, TL Madden Nucleic acids research 32 (suppl_2), W20-W25, 2004	1329	2004
Database resources of the National Center for Biotechnology DL Wheeler, DM Church, S Federhen, AE Lash, TL Madden, JU Pontius, ... Nucleic acids research 31 (1), 28-33, 2003	951	2003
Database resources of the national center for biotechnology information NR Coordinators Nucleic acids research 41 (D1), D8-D20, 2012	915	2012
Database resources of the national center for biotechnology information DL Wheeler, T Barrett, DA Benson, SH Bryant, K Canese, V Chetvernin, ... Nucleic acids research 36 (suppl_1), D13-D21, 2007	809	2007
Database indexing for production MegaBLAST searches A Morgulis, G Coulouris, Y Raytselis, TL Madden, R Agarwala, ... Bioinformatics 24 (16), 1757-1764, 2008	664	2008
Database resources of the national center for biotechnology information DL Wheeler, T Barrett, DA Benson, SH Bryant, K Canese, DM Church, ... Nucleic acids research 33 (suppl_1), D39-D45, 2005	551	2005
The BLAST Sequence Analysis Tool J McEntyre, J Ostell, T Madden National Center for Biotechnology Information (US), 2002	505*	2002
PowerBLAST: a new network BLAST application for interactive or automated sequence analysis and annotation J Zhang, TL Madden Genome Research 7 (6), 649-656, 1997	472	1997
Domain enhanced lookup time accelerated BLAST GM Boratyn, AA Schäffer, R Agarwala, SF Altschul, DJ Lipman, ... Biology direct 7 (1), 12, 2012	466	2012
[9] Applications of network BLAST server TL Madden, RL Tatusov, J Zhang Methods in enzymology 266, 131-141, 1996	454	1996
BLAST: a more efficient report with usability improvements GM Boratyn, C Camacho, PS Cooper, G Coulouris, A Fong, N Ma, ... Nucleic acids research 41 (W1), W29-W33, 2013	437	2013
Database resources of the National Center for Biotechnology Information: update DL Wheeler, DM Church, R Edgar, S Federhen, W Helmberg, TL Madden, ... Nucleic acids research 32 (suppl_1), D35-D40, 2004	427	2004
IgBLAST: an immunoglobulin variable domain sequence analysis tool J Ye, N Ma, TL Madden, JM Ostell Nucleic acids research 41 (W1), W34-W40, 2013	403	2013

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