| Selecting optimal partitioning schemes for phylogenomic datasets R Lanfear, B Calcott, D Kainer, C Mayer, A Stamatakis BMC evolutionary biology 14 (1), 82, 2014 | 348 | 2014 |
| The effects of partitioning on phylogenetic inference D Kainer, R Lanfear Molecular biology and evolution 32 (6), 1611-1627, 2015 | 56 | 2015 |
| Plant-Derived Terpenes: A Feedstock for Specialty Biofuels R Mewalal, DK Rai, D Kainer, F Chen, C Külheim, GF Peter, GA Tuskan Trends in Biotechnology 35 (3), 227-240, 2017 | 44 | 2017 |
| MinIONQC: fast and simple quality control for MinION sequencing data R Lanfear, M Schalamun, D Kainer, W Wang, B Schwessinger Bioinformatics 35 (3), 523-525, 2018 | 13 | 2018 |
| Genomic approaches to selection in outcrossing perennials: focus on essential oil crops D Kainer, R Lanfear, WJ Foley, C Külheim Theoretical and Applied Genetics 128 (12), 2351-2365, 2015 | 12 | 2015 |
| Harnessing the MinION: An example of how to establish long‐read sequencing in a laboratory using challenging plant tissue from Eucalyptus pauciflora M Schalamun, R Nagar, D Kainer, E Beavan, D Eccles, JP Rathjen, ... Molecular ecology resources 19 (1), 77-89, 2019 | 9 | 2019 |
| Assessment of a non-destructive method to predict oil yield in Eucalyptus polybractea (blue mallee) D Kainer, D Bush, WJ Foley, C Külheim Industrial Crops and Products 102, 32-44, 2017 | 8 | 2017 |
| Multi‐trait genome‐wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits HB Chhetri, DM Sanz, D Kainer, AK Biswal, LM Evans, JG Chen, ... New Phytologist, 2019 | 5 | 2019 |
| Accuracy of Genomic Prediction for Foliar Terpene Traits in Eucalyptus polybractea D Kainer, EA Stone, A Padovan, WJ Foley, C Külheim G3: Genes, Genomes, Genetics 8 (8), 2573-2583, 2018 | 5 | 2018 |
| Transcriptome analysis of terpene chemotypes of Melaleuca alternifolia across different tissues C Bustos‐Segura, A Padovan, D Kainer, WJ Foley, C Külheim Plant, cell & environment 40 (10), 2406-2425, 2017 | 5 | 2017 |
| Attacking the opioid epidemic: determining the epistatic and pleiotropic genetic architectures for chronic pain and opioid addiction W Joubert, D Weighill, D Kainer, S Climer, A Justice, K Fagnan, ... Proceedings of the International Conference for High Performance Computing …, 2018 | 4 | 2018 |
| Accelerating Climate Resilient Plant Breeding by Applying Next-Generation Artificial Intelligence AL Harfouche, DA Jacobson, D Kainer, JC Romero, AH Harfouche, ... Trends in Biotechnology, 2019 | 3 | 2019 |
| Assembly of chloroplast genomes with long-and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case W Wang, M Schalamun, A Morales-Suarez, D Kainer, B Schwessinger, ... BMC genomics 19 (1), 977, 2018 | 3 | 2018 |
| High Throughput Screening Technologies in Biomass Characterization SR Decker, AE Harman-Ware, RM Happs, EJ Wolfrum, GA Tuskan, ... Frontiers in Energy Research 6, 120, 2018 | 2 | 2018 |
| High marker density GWAS provides novel insights into the genomic architecture of terpene oil yield in Eucalyptus D Kainer, A Padovan, J Degenhardt, S Krause, P Mondal, WJ Foley, ... New Phytologist, 2019 | 1 | 2019 |
| Finding New Cell Wall Regulatory Genes in Populus trichocarpa Using Multiple Lines of Evidence A Furches, D Kainer, D Weighill, A Large, P Jones, AM Walker, J Romero, ... Frontiers in plant science 10, 1249, 2019 | 1 | 2019 |
| A High Performance Computing Implementation of Iterative Random Forest for the Creation of Predictive Expression Networks A Cliff, J Romero, D Kainer, D Jacobson Preprints, 2019 | | 2019 |
| A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant AJ Orr, A Padovan, D Kainer, C Külheim, L Bromham, C Bustos-Segura, ... bioRxiv, 727982, 2019 | | 2019 |
| The draft nuclear genome assembly of Eucalyptus pauciflora: new approaches to comparing de novo assemblies A Das, D Kainer, M Schalamun, AM Suarez, B Schwessinger, R Lanfear bioRxiv, 678730, 2019 | | 2019 |
| Comprehensive Spectral Analysis of Pyrolysis-MBMS Data Using Statistical Learning and Bioinformatics Approaches A Large, D Kainer, AE Harman-Ware, T Tschaplinski, W Muchero, ... 2018 AIChE Annual Meeting, 2018 | | 2018 |