| MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline W Iwasaki, T Fukunaga, R Isagozawa, K Yamada, Y Maeda, TP Satoh, ... Molecular biology and evolution 30 (11), 2531-2540, 2013 | 365 | 2013 |
| MiFish, a set of universal PCR primers for metabarcoding environmental DNA from fishes: detection of more than 230 subtropical marine species M Miya, Y Sato, T Fukunaga, T Sado, JY Poulsen, K Sato, T Minamoto, ... Royal Society open science 2 (7), 150088, 2015 | 190 | 2015 |
| Evolutionary origin of the Scombridae (tunas and mackerels): members of a Paleogene adaptive radiation with 14 other pelagic fish families M Miya, M Friedman, TP Satoh, H Takeshima, T Sado, W Iwasaki, ... PloS one 8 (9), e73535, 2013 | 99 | 2013 |
| CapR: revealing structural specificities of RNA-binding protein target recognition using CLIP-seq data T Fukunaga, H Ozaki, G Terai, K Asai, W Iwasaki, H Kiryu Genome biology 15 (1), R16, 2014 | 44 | 2014 |
| RIblast: an ultrafast RNA–RNA interaction prediction system based on a seed-and-extension approach T Fukunaga, M Hamada Bioinformatics 33 (17), 2666-2674, 2017 | 26 | 2017 |
| GroupTracker: video tracking system for multiple animals under severe occlusion T Fukunaga, S Kubota, S Oda, W Iwasaki Computational biology and chemistry 57, 39-45, 2015 | 19 | 2015 |
| MitoFish and MiFish pipeline: a mitochondrial genome database of fish with an analysis pipeline for environmental DNA metabarcoding Y Sato, M Miya, T Fukunaga, T Sado, W Iwasaki Molecular biology and evolution 35 (6), 1553-1555, 2018 | 18 | 2018 |
| Identification and analysis of ribosome-associated lncRNAs using ribosome profiling data C Zeng, T Fukunaga, M Hamada BMC genomics 19 (1), 414, 2018 | 8 | 2018 |
| Rtools: a web server for various secondary structural analyses on single RNA sequences M Hamada, Y Ono, H Kiryu, K Sato, Y Kato, T Fukunaga, R Mori, K Asai Nucleic acids research 44 (W1), W302-W307, 2016 | 8 | 2016 |
| Solar-panel and parasol strategies shape the proteorhodopsin distribution pattern in marine Flavobacteriia Y Kumagai, S Yoshizawa, Y Nakajima, M Watanabe, T Fukunaga, ... The ISME journal 12 (5), 1329, 2018 | 3 | 2018 |
| Inactivity periods and postural change speed can explain atypical postural change patterns of Caenorhabditis elegans mutants T Fukunaga, W Iwasaki BMC bioinformatics 18 (1), 46, 2017 | 2 | 2017 |
| Targeting the TR4 nuclear receptor-mediated lncTASR/AXL signaling with tretinoin increases the sunitinib sensitivity to better suppress the RCC progression H Shi, Y Sun, M He, X Yang, M Hamada, T Fukunaga, X Zhang, C Chang Oncogene, 1-16, 2019 | | 2019 |
| Discovering novel mutation signatures by latent Dirichlet allocation with variational Bayes inference T Matsutani, Y Ueno, T Fukunaga, M Hamada Bioinformatics, 2019 | | 2019 |
| LncRRIsearch: a web server for lncRNA-RNA interaction prediction integrated with tissue-specific expression and subcellular localization data T Fukunaga, J Iwakiri, Y Ono, M Hamada Frontiers in genetics 10, 2019 | | 2019 |
| Computational approaches for alternative and transient secondary structures of ribonucleic acids T Fukunaga, M Hamada Briefings in functional genomics, 2019 | | 2019 |
| A Novel Method for Assessing the Statistical Significance of RNA-RNA Interactions Between Two Long RNAs T Fukunaga, M Hamada Journal of Computational Biology 25 (9), 976-986, 2018 | | 2018 |
| JY Poulsen1, 2, 5, K. Sato6, T. Minamoto2, 7, S. Yamamoto2, 7, H. Yamanaka2, 8, H. Araki2, 9, M. Kondoh2, 8 and W. Iwasaki2, 4, 10 M Miya, Y Sato, T Fukunaga, T Sado | | |
Wataru IwasakiAssociate Professor, Department of Biological Sciences, the University of TokyoDirección de correo verificada de bs.s.u-tokyo.ac.jp
