David Páez-Espino - Citas de Google Académico

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	Total	Desde 2014
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Coautores

Nikos C KyrpidesDOE Joint Genome InstituteDirección de correo verificada de lbl.gov
Víctor de LorenzoProfessor of Research of the CSICDirección de correo verificada de cnb.csic.es
Emiley Eloe-FadroshMetagenome Program Head, Joint Genome InstituteDirección de correo verificada de lbl.gov
Georgios A. PavlopoulosHead of Bioinformatics (Associate Professor rank), BSRC "Alexander Fleming"Dirección de correo verificada de fleming.gr
Jillian BANFIELDUniversity of California BerkeleyDirección de correo verificada de berkeley.edu
Manoj PillaySoftware Engineer, AmazonDirección de correo verificada de amazon.com
Tanja WoykeDOE Joint Genome InstituteDirección de correo verificada de lbl.gov
Wesley MorovicDuPont Nutrition & HealthDirección de correo verificada de dupont.com
Gonzalo Durante-RodríguezPostdoctoral Researcher (CIB-CSIC)Dirección de correo verificada de cib.csic.es
Max Chavarría1. Escuela de Química & CIPRONA, Universidad de Costa Rica. 2. CENIBiot (CENAT-CONARE)Dirección de correo verificada de ucr.ac.cr
Rodolphe BarrangouNorth Carolina State UniversityDirección de correo verificada de ncsu.edu
Brian C. ThomasCEO/Founder, Metagenomi.coDirección de correo verificada de metagenomi.co
Rekha SeshadriDepartment of Energy JGIDirección de correo verificada de lbl.gov
Rafael Silva-RochaAssociate Professor at FMRP-USPDirección de correo verificada de usp.br
Aitor de las HerasResearch Associate, The University of EdinburghDirección de correo verificada de ed.ac.uk
Raúl A. PlateroAssistant Professor, Microbial Biochemistry and Genomic Department, Instituto de InvestigacionesDirección de correo verificada de iibce.edu.uy
Pablo Iván Nikel MayerSenior Researcher & Group Leader at The Novo Nordisk Foundation Center for BiosustainabilityDirección de correo verificada de biosustain.dtu.dk
David CánovasUniversidad de SevillaDirección de correo verificada de us.es
Hans-Peter KlenkNewcastle University, Newcastle upon TyneDirección de correo verificada de newcastle.ac.uk
Ken-ichi UedaUniversity of California Berkeley, California Academy of SciencesDirección de correo verificada de calacademy.org

David Páez-Espino

DOE-JGI

Dirección de correo verificada de lbl.gov

Microbiome Microbiology virus-bacteriophage CRISPR-Cas SynBio


Título	Citado por	Año
The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes R Silva-Rocha, E Martínez-García, B Calles, M Chavarría, ... Nucleic acids research 41 (D1), D666-D675, 2012	314	2012
Uncovering Earth’s virome D Paez-Espino, EA Eloe-Fadrosh, GA Pavlopoulos, AD Thomas, ... Nature 536 (7617), 425, 2016	312	2016
Microbial responses to environmental arsenic D Páez-Espino, J Tamames, V de Lorenzo, D Cánovas Biometals 22 (1), 117-130, 2009	260	2009
Strong bias in the bacterial CRISPR elements that confer immunity to phage D Paez-Espino, W Morovic, CL Sun, BC Thomas, K Ueda, B Stahl, ... Nature Communications 4, 1430, 2013	151	2013
The standard operating procedure of the DOE-JGI microbial genome annotation pipeline (MGAP v. 4) M Huntemann, NN Ivanova, K Mavromatis, HJ Tripp, D Paez-Espino, ... Standards in genomic sciences 10 (1), 86, 2015	143	2015
1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ... Nature biotechnology 35 (7), 676, 2017	106	2017
CRISPR immunity drives rapid phage genome evolution in Streptococcus thermophilus D Paez-Espino, I Sharon, W Morovic, B Stahl, BC Thomas, R Barrangou, ... MBio 6 (2), e00262-15, 2015	95	2015
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359, 2018	70	2018
Global metagenomic survey reveals a new bacterial candidate phylum in geothermal springs EA Eloe-Fadrosh, D Paez-Espino, J Jarett, PF Dunfield, BP Hedlund, ... Nature communications 7, 10476, 2016	68	2016
IMG/VR: a database of cultured and uncultured DNA Viruses and retroviruses D Paez-Espino, IMA Chen, K Palaniappan, A Ratner, K Chu, E Szeto, ... Nucleic acids research, gkw1030, 2016	59	2016
The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v. 4) M Huntemann, NN Ivanova, K Mavromatis, HJ Tripp, D Paez-Espino, ... Standards in genomic sciences 11 (1), 17, 2016	55	2016
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes LB Harrington, D Burstein, JS Chen, D Paez-Espino, E Ma, IP Witte, ... Science 362 (6416), 839-842, 2018	52	2018
A thermostable Cas9 with increased lifetime in human plasma LB Harrington, D Paez-Espino, BT Staahl, JS Chen, E Ma, NC Kyrpides, ... Nature communications 8 (1), 1424, 2017	38	2017
Murine colitis reveals a disease-associated bacteriophage community BA Duerkop, M Kleiner, D Paez-Espino, W Zhu, B Bushnell, B Hassell, ... Nature microbiology 3 (9), 1023, 2018	28	2018
Antarctic archaea–virus interactions: metaproteome-led analysis of invasion, evasion and adaptation B Tschitschko, TJ Williams, MA Allen, D Páez-Espino, N Kyrpides, ... The ISME journal 9 (9), 2094, 2015	28	2015
Minimum information about an uncultivated virus genome (MIUViG) S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ... Nature biotechnology 37 (1), 29, 2019	27	2019
Functional coexistence of twin arsenic resistance systems in Pseudomonas putida KT2440 AD Páez‐Espino, G Durante‐Rodríguez, V de Lorenzo Environmental microbiology 17 (1), 229-238, 2015	26	2015
The standard operating procedure of the DOE-JGI microbial genome annotation pipeline (MGAP v. 4). Stand Genomic Sci 10: 86 M Huntemann, NN Ivanova, K Mavromatis, HJ Tripp, D Paez-Espino, ...	22	2015
IMG/VR v. 2.0: an integrated data management and analysis system for cultivated and environmental viral genomes D Paez-Espino, S Roux, IMA Chen, K Palaniappan, A Ratner, K Chu, ... Nucleic acids research 47 (D1), D678-D686, 2018	21	2018
On the origin of reverse transcriptase-using CRISPR-Cas systems and their hyperdiverse, enigmatic spacer repertoires S Silas, KS Makarova, S Shmakov, D Páez-Espino, G Mohr, Y Liu, ... MBio 8 (4), e00897-17, 2017	21	2017

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