| A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome M Sultan, MH Schulz, H Richard, A Magen, A Klingenhoff, M Scherf, ... Science 321 (5891), 956-960, 2008 | 1329 | 2008 |
| The genome of a songbird WC Warren, DF Clayton, H Ellegren, AP Arnold, LDW Hillier, A Künstner, ... Nature 464 (7289), 757-762, 2010 | 702 | 2010 |
| Assessment of transcript reconstruction methods for RNA-seq T Steijger, JF Abril, PG Engström, F Kokocinski, M Akerman, T Alioto, ... Nature methods 10 (12), 1177, 2013 | 427 | 2013 |
| Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments H Richard, MH Schulz, M Sultan, A Nurnberger, S Schrinner, D Balzereit, ... Nucleic acids research 38 (10), e112-e112, 2010 | 184 | 2010 |
| Prediction of alternative isoforms from exon expression levels in RNA-Seq experiments H Richard, MH Schulz, M Sultan, A Nurnberger, S Schrinner, D Balzereit, ... Nucleic acids research 38 (10), e112-e112, 2010 | 184 | 2010 |
| X-exome sequencing of 405 unresolved families identifies seven novel intellectual disability genes H Hu, SA Haas, J Chelly, H Van Esch, M Raynaud, APM De Brouwer, ... Molecular psychiatry 21 (1), 133, 2016 | 137 | 2016 |
| Erratum to: Mutation screening in 86 known X-linked mental retardation genes by droplet-based multiplex PCR and massive parallel sequencing H Hu, K Wrogemann, V Kalscheuer, A Tzschach, H Richard, SA Haas, ... The HUGO journal 3 (1), 83-83, 2009 | 70* | 2009 |
| Mutation screening in 86 known X-linked mental retardation genes by droplet-based multiplex PCR and massive parallel sequencing H Hu, K Wrogemann, V Kalscheuer, A Tzschach, H Richard, SA Haas, ... The HUGO journal 3 (1-4), 41-49, 2009 | 69 | 2009 |
| Fiona: a parallel and automatic strategy for read error correction MH Schulz, D Weese, M Holtgrewe, V Dimitrova, S Niu, K Reinert, ... Bioinformatics 30 (17), i356-i363, 2014 | 60 | 2014 |
| Comprehensive identification and quantification of microbial transcriptomes by genome-wide unbiased methods U Mäder, P Nicolas, H Richard, P Bessières, S Aymerich Current Opinion in Biotechnology 22 (1), 32-41, 2011 | 59 | 2011 |
| Occurrence probability of structured motifs in random sequences S Robin, JJ Daudin, H Richard, MF Sagot, S Schbath Journal of Computational Biology 9 (6), 761-773, 2002 | 58 | 2002 |
| The diversity of small non-coding RNAs in the diatom Phaeodactylum tricornutum A Rogato, H Richard, A Sarazin, B Voss, SC Navarro, R Champeimont, ... BMC Genomics 15 (1), 698, 2014 | 21 | 2014 |
| Ulysses: accurate detection of low-frequency structural variations in large insert-size sequencing libraries A Gillet-Markowska, H Richard, G Fischer, I Lafontaine Bioinformatics 31 (6), 801-808, 2014 | 15 | 2014 |
| PureCLIP: capturing target-specific protein–RNA interaction footprints from single-nucleotide CLIP-seq data S Krakau, H Richard, A Marsico Genome biology 18 (1), 240, 2017 | 13 | 2017 |
| Parseq: reconstruction of microbial transcription landscape from RNA-Seq read counts using state-space models B Mirauta, P Nicolas, H Richard Bioinformatics 30 (10), 1409-1416, 2014 | 11 | 2014 |
| Identification of programmed translational-1 frameshifting sites in the genome of Saccharomyces cerevisiae M Bekaert, H Richard, B Prum, JP Rousset Genome research 15 (10), 1411-1420, 2005 | 8 | 2005 |
| seq++: analyzing biological sequences with a range of Markov-related models V Miele, PY Bourguignon, D Robelin, G Nuel, H Richard Bioinformatics 21 (11), 2783-2784, 2005 | 8 | 2005 |
| SIC: a tool to detect short inverted segments in a biological sequence D Robelin, H Richard, B Prum Nucleic acids research 31 (13), 3669-3671, 2003 | 6 | 2003 |
| SPA: simple web tool to assess statistical significance of DNA patterns H Richard, G Nuel Nucleic acids research 31 (13), 3679-3681, 2003 | 4 | 2003 |
| DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data C Saad, L Noé, H Richard, J Leclerc, MP Buisine, H Touzet, M Figeac BMC bioinformatics 19 (1), 223, 2018 | 3 | 2018 |