| The similarity metric M Li, X Chen, X Li, B Ma, PMB Vitányi IEEE transactions on Information Theory 50 (12), 3250-3264, 2004 | 1287 | 2004 |
| An information-based sequence distance and its application to whole mitochondrial genome phylogeny M Li, JH Badger, X Chen, S Kwong, P Kearney, H Zhang Bioinformatics 17 (2), 149-154, 2001 | 612 | 2001 |
| A compression algorithm for DNA sequences and its applications in genome comparison X Chen, S Kwong, M Li Genome informatics 10, 51-61, 1999 | 322 | 1999 |
| Shared information and program plagiarism detection X Chen, B Francia, M Li, B Mckinnon, A Seker IEEE Transactions on Information Theory 50 (7), 1545-1551, 2004 | 313 | 2004 |
| DNACompress: fast and effective DNA sequence compression X Chen, M Li, B Ma, J Tromp Bioinformatics 18 (12), 1696-1698, 2002 | 265 | 2002 |
| Assignment of orthologous genes via genome rearrangement X Chen, J Zheng, Z Fu, P Nan, Y Zhong, S Lonardi, T Jiang IEEE/ACM Transactions on Computational Biology and Bioinformatics (TCBB) 2 …, 2005 | 167 | 2005 |
| A compression algorithm for DNA sequences X Chen, S Kwong, M Li IEEE Engineering in Medicine and biology Magazine 20 (4), 61-66, 2001 | 111 | 2001 |
| MSOAR: a high-throughput ortholog assignment system based on genome rearrangement Z Fu, X Chen, V Vacic, P Nan, Y Zhong, T Jiang Journal of Computational Biology 14 (9), 1160-1175, 2007 | 92 | 2007 |
| Operon prediction by comparative genomics: an application to the Synechococcus sp. WH8102 genome X Chen, Z Su, P Dam, B Palenik, Y Xu, T Jiang Nucleic acids research 32 (7), 2147-2157, 2004 | 89 | 2004 |
| Prediction of protein structural classes for low-homology sequences based on predicted secondary structure JY Yang, ZL Peng, X Chen BMC bioinformatics 11 (1), S9, 2010 | 85 | 2010 |
| Improving taxonomy‐based protein fold recognition by using global and local features JY Yang, X Chen Proteins: Structure, Function, and Bioinformatics 79 (7), 2053-2064, 2011 | 54 | 2011 |
| Computing the assignment of orthologous genes via genome rearrangement X Chen, J Zheng, Z Fu, P Nan, Y Zhong, S Lonardi, T Jiang Proceedings of the 3rd Asia-Pacific Bioinformatics Conference, 363-378, 2005 | 48 | 2005 |
| A new compression scheme for color-quantized images X Chen, S Kwong, J Feng IEEE Transactions on Circuits and Systems for Video Technology 12 (10), 904-908, 2002 | 47 | 2002 |
| An improved classification of G-protein-coupled receptors using sequence-derived features ZL Peng, JY Yang, X Chen BMC bioinformatics 11 (1), 420, 2010 | 46 | 2010 |
| Computational prediction of operons in Synechococcus sp. WH8102 X Chen, Z Su, Y Xu, T Jiang Genome Informatics 15 (2), 211-222, 2004 | 42 | 2004 |
| W-AlignACE: an improved Gibbs sampling algorithm based on more accurate position weight matrices learned from sequence and gene expression/ChIP-chip data X Chen, L Guo, Z Fan, T Jiang Bioinformatics 24 (9), 1121-1128, 2008 | 39 | 2008 |
| Computational inference of regulatory pathways in microbes Z Su, P Dam, X Chen, V Olman, T Jiang, B Palenik, Y Xu Genome Informatics 14, 3-13, 2003 | 35 | 2003 |
| On sorting unsigned permutations by double-cut-and-joins X Chen Journal of Combinatorial Optimization 25 (3), 339-351, 2013 | 31 | 2013 |
| A parsimony approach to genome-wide ortholog assignment Z Fu, X Chen, V Vacic, P Nan, Y Zhong, T Jiang Annual International Conference on Research in Computational Molecular …, 2006 | 25 | 2006 |
| A theory of uncheatable program plagiarism detection and its practical implementation X Chen, M Li, B Mckinnon, A Seker SID website at http://dna. cs. ucsb. edu/SID, 2002 | 24 | 2002 |
