| Community proteomics of a natural microbial biofilm RJ Ram, NC VerBerkmoes, MP Thelen, GW Tyson, BJ Baker, RC Blake, ... Science 308 (5730), 1915-1920, 2005 | 703 | 2005 |
| Characterizing a model human gut microbiota composed of members of its two dominant bacterial phyla MA Mahowald, FE Rey, H Seedorf, PJ Turnbaugh, RS Fulton, A Wollam, ... Proceedings of the National Academy of Sciences 106 (14), 5859-5864, 2009 | 523 | 2009 |
| Shotgun metaproteomics of the human distal gut microbiota NC Verberkmoes, AL Russell, M Shah, A Godzik, M Rosenquist, ... The ISME journal 3 (2), 179, 2009 | 461 | 2009 |
| Detecting differential and correlated protein expression in label-free shotgun proteomics B Zhang, NC VerBerkmoes, MA Langston, E Uberbacher, RL Hettich, ... Journal of proteome research 5 (11), 2909-2918, 2006 | 427 | 2006 |
| Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla KC Wrighton, BC Thomas, I Sharon, CS Miller, CJ Castelle, ... Science 337 (6102), 1661-1665, 2012 | 413 | 2012 |
| Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease AR Erickson, BL Cantarel, R Lamendella, Y Darzi, EF Mongodin, C Pan, ... PloS one 7 (11), e49138, 2012 | 319 | 2012 |
| Enigmatic, ultrasmall, uncultivated Archaea BJ Baker, LR Comolli, GJ Dick, LJ Hauser, D Hyatt, BD Dill, ML Land, ... Proceedings of the National Academy of Sciences 107 (19), 8806-8811, 2010 | 239 | 2010 |
| Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria I Lo, VJ Denef, NC VerBerkmoes, MB Shah, D Goltsman, G DiBartolo, ... Nature 446 (7135), 537, 2007 | 239 | 2007 |
| Systems biology: functional analysis of natural microbial consortia using community proteomics NC VerBerkmoes, VJ Denef, RL Hettich, JF Banfield Nature Reviews Microbiology 7 (3), 196, 2009 | 236 | 2009 |
| Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes J Hultman, MP Waldrop, R Mackelprang, MM David, J McFarland, ... Nature 521 (7551), 208, 2015 | 225 | 2015 |
| Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics CJ Gobler, DL Berry, ST Dyhrman, SW Wilhelm, A Salamov, AV Lobanov, ... Proceedings of the National Academy of Sciences 108 (11), 4352-4357, 2011 | 219 | 2011 |
| Molecular dynamics of the Shewanella oneidensis response to chromate stress SD Brown, MR Thompson, NC VerBerkmoes, K Chourey, M Shah, J Zhou, ... Molecular & Cellular Proteomics 5 (6), 1054-1071, 2006 | 184 | 2006 |
| Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing “Leptospirillum rubarum”(Group II) and “Leptospirillum ferrodiazotrophum”(Group III) bacteria in … DSA Goltsman, VJ Denef, SW Singer, NC VerBerkmoes, M Lefsrud, ... Appl. Environ. Microbiol. 75 (13), 4599-4615, 2009 | 168 | 2009 |
| Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal P Wilmes, AF Andersson, MG Lefsrud, M Wexler, M Shah, B Zhang, ... The ISME journal 2 (8), 853, 2008 | 168 | 2008 |
| Direct cellular lysis/protein extraction protocol for soil metaproteomics K Chourey, J Jansson, N VerBerkmoes, M Shah, KL Chavarria, LM Tom, ... Journal of proteome research 9 (12), 6615-6622, 2010 | 163 | 2010 |
| Integrating “top-down” and “bottom-up” mass spectrometric approaches for proteomic analysis of Shewanella oneidensis NC VerBerkmoes, JL Bundy, L Hauser, KG Asano, J Razumovskaya, ... Journal of proteome research 1 (3), 239-252, 2002 | 155 | 2002 |
| Proteogenomic basis for ecological divergence of closely related bacteria in natural acidophilic microbial communities VJ Denef, LH Kalnejais, RS Mueller, P Wilmes, BJ Baker, BC Thomas, ... Proceedings of the National Academy of Sciences 107 (6), 2383-2390, 2010 | 148 | 2010 |
| Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis XF Wan, NC VerBerkmoes, LA McCue, D Stanek, H Connelly, LJ Hauser, ... Journal of Bacteriology 186 (24), 8385-8400, 2004 | 143 | 2004 |
| Environmental proteomics of microbial plankton in a highly productive coastal upwelling system SM Sowell, PE Abraham, M Shah, NC Verberkmoes, DP Smith, ... The ISME journal 5 (5), 856, 2011 | 141 | 2011 |
| Twelve previously unknown phage genera are ubiquitous in global oceans K Holmfeldt, N Solonenko, M Shah, K Corrier, L Riemann, ... Proceedings of the National Academy of Sciences 110 (31), 12798-12803, 2013 | 132 | 2013 |
