| Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans I Comas, M Coscolla, T Luo, S Borrell, KE Holt, M Kato-Maeda, J Parkhill, ... Nature genetics 45 (10), 1176, 2013 | 715 | 2013 |
| Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis KI Bos, KM Harkins, A Herbig, M Coscolla, N Weber, I Comas, SA Forrest, ... Nature 514 (7523), 494, 2014 | 302 | 2014 |
| Consequences of genomic diversity in Mycobacterium tuberculosis M Coscolla, S Gagneux Seminars in immunology 26 (6), 431-444, 2014 | 192 | 2014 |
| Acquired resistance to bedaquiline and delamanid in therapy for tuberculosis GV Bloemberg, S Gagneux, EC Boettger The New England journal of medicine 373 (20), 1986, 2015 | 172 | 2015 |
| Does M. tuberculosis genomic diversity explain disease diversity? M Coscolla, S Gagneux Drug Discovery Today: Disease Mechanisms 7 (1), e43-e59, 2010 | 150 | 2010 |
| Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages D Stucki, D Brites, L Jeljeli, M Coscolla, Q Liu, A Trauner, L Fenner, ... Nature genetics 48 (12), 1535, 2016 | 123 | 2016 |
| Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages D Stucki, B Malla, S Hostettler, T Huna, J Feldmann, D Yeboah-Manu, ... PloS one 7 (7), e41253, 2012 | 109 | 2012 |
| Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee M Coscolla, A Lewin, S Metzger, K Maetz-Rennsing, ... Emerging infectious diseases 19 (6), 969, 2013 | 85 | 2013 |
| Beijing sublineages of Mycobacterium tuberculosis differ in pathogenicity in the guinea pig M Kato-Maeda, CA Shanley, D Ackart, LG Jarlsberg, S Shang, ... Clin. Vaccine Immunol. 19 (8), 1227-1237, 2012 | 74 | 2012 |
| M. tuberculosis T cell epitope analysis reveals paucity of antigenic variation and identifies rare variable TB antigens M Coscolla, R Copin, J Sutherland, F Gehre, B de Jong, O Owolabi, ... Cell host & microbe 18 (5), 538-548, 2015 | 73 | 2015 |
| KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes A Steiner, D Stucki, M Coscolla, S Borrell, S Gagneux BMC genomics 15 (1), 881, 2014 | 66 | 2014 |
| Sequence diversity in the pe_pgrs genes of Mycobacterium tuberculosis is independent of human T cell recognition R Copin, M Coscollá, SN Seiffert, G Bothamley, J Sutherland, G Mbayo, ... MBio 5 (1), e00960-13, 2014 | 63 | 2014 |
| Tracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing D Stucki, M Ballif, T Bodmer, M Coscolla, AM Maurer, S Droz, C Butz, ... The Journal of infectious diseases 211 (8), 1306-1316, 2014 | 62 | 2014 |
| Standard genotyping overestimates transmission of Mycobacterium tuberculosis among immigrants in a low-incidence country D Stucki, M Ballif, M Egger, H Furrer, E Altpeter, M Battegay, S Droz, ... Journal of clinical microbiology 54 (7), 1862-1870, 2016 | 59 | 2016 |
| Reversion of antibiotic resistance in Mycobacterium tuberculosis by spiroisoxazoline SMARt-420 N Blondiaux, M Moune, M Desroses, R Frita, M Flipo, V Mathys, ... Science 355 (6330), 1206-1211, 2017 | 51 | 2017 |
| Mapping of Genotype–Phenotype Diversity among Clinical Isolates of Mycobacterium tuberculosis by Sequence-Based Transcriptional Profiling G Rose, T Cortes, I Comas, M Coscolla, S Gagneux, DB Young Genome biology and evolution 5 (10), 1849-1862, 2013 | 51 | 2013 |
| Quantifying Nonvertical Inheritance in the Evolution of Legionella pneumophila M Coscollá, I Comas, F González-Candelas Molecular biology and evolution 28 (2), 985-1001, 2010 | 48 | 2010 |
| Drug resistance-conferring mutations in Mycobacterium tuberculosis from Madang, Papua New Guinea M Ballif, P Harino, S Ley, M Coscolla, S Niemann, R Carter, C Coulter, ... BMC microbiology 12 (1), 191, 2012 | 44 | 2012 |
| Population structure and recombination in environmental isolates of Legionella pneumophila M Coscollá, F González‐Candelas Environmental microbiology 9 (3), 643-656, 2007 | 44 | 2007 |
| Impact of in vitro evolution on antigenic diversity of Mycobacterium bovis bacillus Calmette-Guerin (BCG) R Copin, M Coscollá, E Efstathiadis, S Gagneux, JD Ernst Vaccine 32 (45), 5998-6004, 2014 | 43 | 2014 |
Sebastien GagneuxSwiss Tropical and Public Health InstituteVerified email at swisstph.ch
