| QIIME allows analysis of high-throughput community sequencing data JG Caporaso, J Kuczynski, J Stombaugh, K Bittinger, FD Bushman, ... Nature methods 7 (5), 335, 2010 | 17672 | 2010 |
| Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, J Huntley, N Fierer, ... The ISME journal 6 (8), 1621, 2012 | 3952 | 2012 |
| Linking long-term dietary patterns with gut microbial enterotypes GD Wu, J Chen, C Hoffmann, K Bittinger, YY Chen, SA Keilbaugh, ... Science 334 (6052), 105-108, 2011 | 3646 | 2011 |
| Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample JG Caporaso, CL Lauber, WA Walters, D Berg-Lyons, CA Lozupone, ... Proceedings of the national academy of sciences 108 (Supplement 1), 4516-4522, 2011 | 3488 | 2011 |
| Gut microbiota from twins discordant for obesity modulate metabolism in mice VK Ridaura, JJ Faith, FE Rey, J Cheng, AE Duncan, AL Kau, NW Griffin, ... Science 341 (6150), 1241214, 2013 | 2007 | 2013 |
| Examining the global distribution of dominant archaeal populations in soil ST Bates, D Berg-Lyons, JG Caporaso, WA Walters, R Knight, N Fierer The ISME journal 5 (5), 908, 2011 | 740 | 2011 |
| Experimental and analytical tools for studying the human microbiome J Kuczynski, CL Lauber, WA Walters, LW Parfrey, JC Clemente, D Gevers, ... Nature Reviews Genetics 13 (1), 47, 2012 | 511 | 2012 |
| A communal catalogue reveals Earth’s multiscale microbial diversity LR Thompson, JG Sanders, D McDonald, A Amir, J Ladau, KJ Locey, ... Nature 551 (7681), 457, 2017 | 444 | 2017 |
| Meta‐analyses of human gut microbes associated with obesity and IBD WA Walters, Z Xu, R Knight FEBS letters 588 (22), 4223-4233, 2014 | 406 | 2014 |
| The under-recognized dominance of Verrucomicrobia in soil bacterial communities GT Bergmann, ST Bates, KG Eilers, CL Lauber, JG Caporaso, WA Walters, ... Soil Biology and Biochemistry 43 (7), 1450-1455, 2011 | 392 | 2011 |
| Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys JJ Werner, O Koren, P Hugenholtz, TZ DeSantis, WA Walters, ... The ISME journal 6 (1), 94, 2012 | 361 | 2012 |
| Using QIIME to analyze 16S rRNA gene sequences from microbial communities J Kuczynski, J Stombaugh, WA Walters, A González, JG Caporaso, ... Current protocols in bioinformatics 36 (1), 10.7. 1-10.7. 20, 2011 | 354 | 2011 |
| Using QIIME to analyze 16S rRNA gene sequences from microbial communities J Kuczynski, J Stombaugh, WA Walters, A González, JG Caporaso, ... Current protocols in microbiology 27 (1), 1E. 5.1-1E. 5.20, 2012 | 353 | 2012 |
| Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences JR Rideout, Y He, JA Navas-Molina, WA Walters, LK Ursell, SM Gibbons, ... PeerJ 2, e545, 2014 | 349 | 2014 |
| Conducting a microbiome study JK Goodrich, SC Di Rienzi, AC Poole, O Koren, WA Walters, JG Caporaso, ... Cell 158 (2), 250-262, 2014 | 309 | 2014 |
| PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers WA Walters, JG Caporaso, CL Lauber, D Berg-Lyons, N Fierer, R Knight Bioinformatics 27 (8), 1159-1161, 2011 | 275 | 2011 |
| Transient inability to manage proteobacteria promotes chronic gut inflammation in TLR5-deficient mice FA Carvalho, O Koren, JK Goodrich, MEV Johansson, I Nalbantoglu, ... Cell host & microbe 12 (2), 139-152, 2012 | 262 | 2012 |
| Dynamics of the human gut microbiome in inflammatory bowel disease J Halfvarson, CJ Brislawn, R Lamendella, Y Vázquez-Baeza, WA Walters, ... Nature microbiology 2 (5), 17004, 2017 | 242 | 2017 |
| Simultaneous amplicon sequencing to explore co-occurrence patterns of bacterial, archaeal and eukaryotic microorganisms in rumen microbial communities S Kittelmann, H Seedorf, WA Walters, JC Clemente, R Knight, JI Gordon, ... PloS one 8 (2), e47879, 2013 | 236 | 2013 |
| Global biogeography of highly diverse protistan communities in soil ST Bates, JC Clemente, GE Flores, WA Walters, LW Parfrey, R Knight, ... The ISME journal 7 (3), 652, 2013 | 228 | 2013 |
