| ASTRID: accurate species trees from internode distances P Vachaspati, T Warnow BMC genomics 16 (10), S3, 2015 | 100 | 2015 |
| Phylogenomic species tree estimation in the presence of incomplete lineage sorting and horizontal gene transfer R Davidson, P Vachaspati, S Mirarab, T Warnow BMC genomics 16 (10), S1, 2015 | 41 | 2015 |
| Optical rotation in excess of 100 rad generated by Rb vapor in a multipass cell S Li, P Vachaspati, D Sheng, N Dural, MV Romalis Physical review A 84 (6), 061403, 2011 | 35 | 2011 |
| Phylogenomics from whole genome sequences using aTRAM JM Allen, B Boyd, NP Nguyen, P Vachaspati, T Warnow, DI Huang, ... Systematic biology 66 (5), 786-798, 2017 | 25 | 2017 |
| FastRFS: fast and accurate Robinson-Foulds Supertrees using constrained exact optimization P Vachaspati, T Warnow Bioinformatics 33 (5), 631-639, 2016 | 22 | 2016 |
| SVDquest: Improving SVDquartets species tree estimation using exact optimization within a constrained search space P Vachaspati, T Warnow Molecular phylogenetics and evolution 124, 122-136, 2018 | 11 | 2018 |
| Primates, lice and bacteria: speciation and genome evolution in the symbionts of hominid lice BM Boyd, JM Allen, NP Nguyen, P Vachaspati, ZS Quicksall, T Warnow, ... Molecular biology and evolution 34 (7), 1743-1757, 2017 | 11 | 2017 |
| OCTAL: Optimal Completion of gene trees in polynomial time S Christensen, EK Molloy, P Vachaspati, T Warnow Algorithms for Molecular Biology 13 (1), 6, 2018 | 5 | 2018 |
| Fast evaluation of multi-hadron correlation functions P Vachaspati, W Detmold arXiv preprint arXiv:1411.3691, 2014 | 3 | 2014 |
| SIESTA: enhancing searches for optimal supertrees and species trees P Vachaspati, T Warnow BMC genomics 19 (5), 252, 2018 | 2 | 2018 |
| Quantum Dots: Theory, Application, Synthesis P Vachaspati | 2 | 2013 |
| Enhancing searches for optimal trees using SIESTA P Vachaspati, T Warnow RECOMB International Workshop on Comparative Genomics, 232-255, 2017 | 1 | 2017 |
| Optimal completion of incomplete gene trees in polynomial time using OCTAL S Christensen, EK Molloy, P Vachaspati, T Warnow 17th International Workshop on Algorithms in Bioinformatics (WABI 2017), 2017 | 1 | 2017 |
| TRACTION: Fast Non-Parametric Improvement of Estimated Gene Trees S Christensen, EK Molloy, P Vachaspati, T Warnow 19th International Workshop on Algorithms in Bioinformatics (WABI 2019), 2019 | | 2019 |
| 6.824 Final Project 2014 C Josephson, J DelPreto, P Vachaspati, S Valdez | | 2014 |
| Optimizing tensor contractions for nuclear correlation functions P Vachaspati Massachusetts Institute of Technology, 2014 | | 2014 |
| Very large optical rotation generated by Rb vapor in a multi-pass cell S Li, P Vachaspati, D Sheng, N Dural, MV Romalis arXiv preprint arXiv:1108.5334, 2011 | | 2011 |
| Faraday rotation spectroscopy in multi-pass atomic vapor cells S Li, P Vachaspati, N Dural, M Romalis APS Division of Atomic, Molecular and Optical Physics Meeting Abstracts, 2011 | | 2011 |
| Multi-pass cells for quantum non-demolition Faraday rotation measurements in Rb vapor P Vachaspati, M Romalis APS Division of Atomic, Molecular and Optical Physics Meeting Abstracts, 2010 | | 2010 |
| A Computer Vision System for 9-Ball Pool P Vachaspati | | |
