| IMG 4 version of the integrated microbial genomes comparative analysis system VM Markowitz, IMA Chen, K Palaniappan, K Chu, E Szeto, M Pillay, ... Nucleic acids research 42 (D1), D560-D567, 2013 | 493 | 2013 |
| Microbial species delineation using whole genome sequences NJ Varghese, S Mukherjee, N Ivanova, KT Konstantinidis, K Mavrommatis, ... Nucleic acids research 43 (14), 6761-6771, 2015 | 320 | 2015 |
| IMG/M: integrated genome and metagenome comparative data analysis system IMA Chen, VM Markowitz, K Chu, K Palaniappan, E Szeto, M Pillay, ... Nucleic acids research, gkw929, 2016 | 258 | 2016 |
| Protein structure determination using metagenome sequence data S Ovchinnikov, H Park, N Varghese, PS Huang, GA Pavlopoulos, DE Kim, ... Science 355 (6322), 294-298, 2017 | 245 | 2017 |
| IMG/M 4 version of the integrated metagenome comparative analysis system VM Markowitz, IMA Chen, K Chu, E Szeto, K Palaniappan, M Pillay, ... Nucleic acids research 42 (D1), D568-D573, 2013 | 223 | 2013 |
| 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life S Mukherjee, R Seshadri, NJ Varghese, EA Eloe-Fadrosh, ... Nature biotechnology 35 (7), 676, 2017 | 106 | 2017 |
| IMG/M v. 5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes IMA Chen, K Chu, K Palaniappan, M Pillay, A Ratner, J Huang, ... Nucleic acids research 47 (D1), D666-D677, 2018 | 93 | 2018 |
| Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection R Seshadri, SC Leahy, GT Attwood, KH Teh, SC Lambie, AL Cookson, ... Nature biotechnology 36 (4), 359, 2018 | 70 | 2018 |
| Genome data provides high support for generic boundaries in Burkholderia sensu lato CW Beukes, M Palmer, P Manyaka, WY Chan, JR Avontuur, E van Zyl, ... Frontiers in microbiology 8, 1154, 2017 | 39 | 2017 |
| Genome sequences for five strains of the emerging pathogen Haemophilus haemolyticus IK Jordan, AB Conley, IV Antonov, RA Arthur, ED Cook, GP Cooper, ... Journal of bacteriology 193 (20), 5879-5880, 2011 | 27 | 2011 |
| Genome‐based evolutionary history of Pseudomonas spp C Hesse, F Schulz, CT Bull, BT Shaffer, Q Yan, N Shapiro, KA Hassan, ... Environmental microbiology 20 (6), 2142-2159, 2018 | 18 | 2018 |
| GlyGly-CTERM and rhombosortase: a C-terminal protein processing signal in a many-to-one pairing with a rhomboid family intramembrane serine protease DH Haft, N Varghese PloS one 6 (12), e28886, 2011 | 18 | 2011 |
| Permanent draft genome of Thiobacillus thioparus DSM 505 T, an obligately chemolithoautotrophic member of the Betaproteobacteria LP Hutt, M Huntemann, A Clum, M Pillay, K Palaniappan, N Varghese, ... Standards in genomic sciences 12 (1), 10, 2017 | 17 | 2017 |
| Absence of genome reduction in diverse, facultative endohyphal bacteria DA Baltrus, K Dougherty, KR Arendt, M Huntemann, A Clum, M Pillay, ... Microbial genomics 3 (2), 2017 | 13 | 2017 |
| Complete genome of Nitrosospira briensis C-128, an ammonia-oxidizing bacterium from agricultural soil MC Rice, JM Norton, F Valois, A Bollmann, PJ Bottomley, MG Klotz, ... Standards in genomic sciences 11 (1), 46, 2016 | 13 | 2016 |
| Permanent draft genome of Thermithiobacillus tepidarius DSM 3134 T, a moderately thermophilic, obligately chemolithoautotrophic member of the Acidithiobacillia R Boden, LP Hutt, M Huntemann, A Clum, M Pillay, K Palaniappan, ... Standards in genomic sciences 11 (1), 74, 2016 | 10 | 2016 |
| Genomes of ubiquitous marine and hypersaline Hydrogenovibrio, Thiomicrorhabdus and Thiomicrospira spp. encode a diversity of mechanisms to sustain … KM Scott, J Williams, CMB Porter, S Russel, TL Harmer, JH Paul, ... Environmental microbiology 20 (8), 2686-2708, 2018 | 9 | 2018 |
| Draft genome sequence of Methylocapsa palsarum NE2T, an obligate methanotroph from subarctic soil KK Miroshnikov, A Didriksen, DG Naumoff, M Huntemann, A Clum, ... Genome Announc. 5 (24), e00504-17, 2017 | 8 | 2017 |
| Relating the disease mutation spectrum to the evolution of the cystic fibrosis transmembrane conductance regulator (CFTR) L Rishishwar, N Varghese, E Tyagi, SC Harvey, IK Jordan, NA McCarty PloS one 7 (8), e42336, 2012 | 8 | 2012 |
| Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of … DN Proença, WB Whitman, N Varghese, N Shapiro, T Woyke, ... Systematic and applied microbiology 41 (2), 94-100, 2018 | 6 | 2018 |
