Andrea Pagnani - Citas de Google Académico

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	Total	Desde 2014
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Coautores

Riccardo Zecchinaprofessor, theoretical physics, Bocconi UniversityDirección de correo verificada de unibocconi.it
Martin WeigtSorbonne Université Paris (former Université Pierre & Marie Curie)Dirección de correo verificada de upmc.fr
Giorgio ParisiProfessor of Theoretical Physics, Rome I University "La Sapienza"Dirección de correo verificada de roma1.infn.it
Alfredo BraunsteinDISAT, Politecnico di TorinoDirección de correo verificada de polito.it
Chris SanderDana-Farber Cancer Institute, Harvard Medical School, Broad Institute, Memorial Sloan KetteringDirección de correo verificada de sanderlab.org
Debora MarksSystems Biology, Harvard Medical SchoolDirección de correo verificada de hms.harvard.edu
Roberto MuletProfesor de Física, Universidad de la HabanaDirección de correo verificada de fisica.uh.cu
Enzo MarinariProfessor of Theoretical Physics, Sapienza Università di RomaDirección de correo verificada de uniroma1.it
Lucy ColwellUniversity of CambridgeDirección de correo verificada de cam.ac.uk
Carlo BaldassiBocconi University; INFNDirección de correo verificada de unibocconi.it
Bryan J. LuntPhD Candidate, University of Illinois as Urbana-ChampaignDirección de correo verificada de illinois.edu
Faruck MorcosUniversity of Texas at Dallas - Dept. Biological SciencesDirección de correo verificada de utdallas.edu
Terence HwaU. C. San DiegoDirección de correo verificada de ucsd.edu
Jose OnuchicCTBP Rice UniversityDirección de correo verificada de rice.edu
Federico Ricci-TersenghiProfessor of Theoretical Physics, "La Sapienza" University, RomaDirección de correo verificada de roma1.infn.it
Paolo ProveroAssociate Professor, University of TurinDirección de correo verificada de unito.it
Marco ZamparoPolitecnico di TorinoDirección de correo verificada de polito.it
Pier Paolo PandolfiDirector, Cancer Center and Cancer Research Institute, Beth Israel Deaconess Medical CenterDirección de correo verificada de bidmc.harvard.edu
Florian KarrethH. Lee Moffitt Cancer CenterDirección de correo verificada de moffitt.org
Riccardo TaulliUniversity of TorinoDirección de correo verificada de unito.it

Andrea Pagnani

Professor at DISAT - Politecnico di Torino, and PI at the IIGM

Dirección de correo verificada de polito.it - Página principal

Statistical physics combinatorial optimization bioinformatics biological modeling statistical inference


Título	Citado por	Año
Direct-coupling analysis of residue coevolution captures native contacts across many protein families F Morcos, A Pagnani, B Lunt, A Bertolino, DS Marks, C Sander, ... Proceedings of the National Academy of Sciences 108 (49), E1293-E1301, 2011	765	2011
Protein 3D structure computed from evolutionary sequence variation DS Marks, LJ Colwell, R Sheridan, TA Hopf, A Pagnani, R Zecchina, ... PLoS One 6 (12), e28766, 2011	715	2011
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence L Peña-Castillo, M Tasan, CL Myers, H Lee, T Joshi, C Zhang, Y Guan, ... Genome biology 9 (1), S2, 2008	258	2008
Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments U Ala, FA Karreth, C Bosia, A Pagnani, R Taulli, V Léopold, Y Tay, ... Proceedings of the National Academy of Sciences 110 (18), 7154-7159, 2013	214	2013
Coloring random graphs R Mulet, A Pagnani, M Weigt, R Zecchina Physical review letters 89 (26), 268701, 2002	214	2002
Critical exponents of the KPZ equation via multi-surface coding numerical simulations E Marinari, A Pagnani, G Parisi Journal of Physics A: Mathematical and General 33 (46), 8181, 2000	143	2000
Polynomial iterative algorithms for coloring and analyzing random graphs A Braunstein, R Mulet, A Pagnani, M Weigt, R Zecchina Physical Review E 68 (3), 036702, 2003	105	2003
Genome-wide analysis identifies a functional association of Tet1 and Polycomb repressive complex 2 in mouse embryonic stem cells F Neri, D Incarnato, A Krepelova, S Rapelli, A Pagnani, R Zecchina, ... Genome biology 14 (8), R91, 2013	104	2013
Width distributions and the upper critical dimension of Kardar-Parisi-Zhang interfaces E Marinari, A Pagnani, G Parisi, Z Rácz Physical review E 65 (2), 026136, 2002	102	2002
Perturbation biology: inferring signaling networks in cellular systems EJ Molinelli, A Korkut, W Wang, ML Miller, NP Gauthier, X Jing, P Kaushik, ... PLoS computational biology 9 (12), e1003290, 2013	101	2013
Modelling competing endogenous RNA networks C Bosia, A Pagnani, R Zecchina PloS one 8 (6), e66609, 2013	100	2013
Fast and accurate multivariate Gaussian modeling of protein families: Predicting residue contacts and protein-interaction partners C Baldassi, M Zamparo, C Feinauer, A Procaccini, R Zecchina, M Weigt, ... PloS one 9 (3), e92721, 2014	83	2014
Simultaneous reconstruction of multiple signaling pathways via the prize-collecting Steiner forest problem N Tuncbag, A Braunstein, A Pagnani, SSC Huang, J Chayes, C Borgs, ... Journal of computational biology 20 (2), 124-136, 2013	80	2013
Improving contact prediction along three dimensions C Feinauer, MJ Skwark, A Pagnani, E Aurell PLoS computational biology 10 (10), e1003847, 2014	74	2014
Glassy transition in a disordered model for the RNA secondary structure A Pagnani, G Parisi, F Ricci-Tersenghi Physical review letters 84 (9), 2026, 2000	72	2000
Scalings of domain wall energies in two dimensional Ising spin glasses C Amoruso, E Marinari, OC Martin, A Pagnani Physical review letters 91 (8), 087201, 2003	64	2003
Estimating the size of the solution space of metabolic networks A Braunstein, R Mulet, A Pagnani BMC bioinformatics 9 (1), 240, 2008	61	2008
Threshold values, stability analysis, and high-q asymptotics for the coloring problem on random graphs F Krząkała, A Pagnani, M Weigt Physical Review E 70 (4), 046705, 2004	61	2004
Simultaneous identification of specifically interacting paralogs and interprotein contacts by direct coupling analysis T Gueudré, C Baldassi, M Zamparo, M Weigt, A Pagnani Proceedings of the National Academy of Sciences 113 (43), 12186-12191, 2016	53	2016
Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach M Bailly-Bechet, A Braunstein, A Pagnani, M Weigt, R Zecchina BMC bioinformatics 11 (1), 355, 2010	47	2010

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