| Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis A Otto, J Bernhardt, H Meyer, M Schaffer, FA Herbst, J Siebourg, U Mäder, ... Nature communications 1, 137, 2010 | 147 | 2010 |
| Diverse sulfate-reducing bacteria of the Desulfosarcina/Desulfococcus clade are the key alkane degraders at marine seeps S Kleindienst, FA Herbst, M Stagars, F Von Netzer, M Von Bergen, ... The ISME journal 8 (10), 2029, 2014 | 108 | 2014 |
| Metaproteogenomic insights beyond bacterial response to naphthalene exposure and bio-stimulation ME Guazzaroni, FA Herbst, I Lores, J Tamames, AI Peláez, ... The ISME journal 7 (1), 122, 2013 | 86 | 2013 |
| Quantitative proteomic view on secreted, cell surface-associated, and cytoplasmic proteins of the methicillin-resistant human pathogen Staphylococcus aureus under iron-limited … K Hempel, FA Herbst, M Moche, M Hecker, D Becher Journal of proteome research 10 (4), 1657-1666, 2011 | 74 | 2011 |
| Insights from quantitative metaproteomics and protein-stable isotope probing into microbial ecology M Von Bergen, N Jehmlich, M Taubert, C Vogt, F Bastida, FA Herbst, ... The ISME journal 7 (10), 1877, 2013 | 71 | 2013 |
| Bioinformatic progress and applications in metaproteogenomics for bridging the gap between genomic sequences and metabolic functions in microbial communities J Seifert, FA Herbst, P Halkjær Nielsen, FJ Planes, N Jehmlich, M Ferrer, ... Proteomics 13 (18-19), 2786-2804, 2013 | 54 | 2013 |
| Elucidation of in situ polycyclic aromatic hydrocarbon degradation by functional metaproteomics (protein‐SIP) FA Herbst, A Bahr, M Duarte, DH Pieper, HH Richnow, M von Bergen, ... Proteomics 13 (18-19), 2910-2920, 2013 | 52 | 2013 |
| Anaerobic naphthalene degradation by sulfate-reducing Desulfobacteraceae from various anoxic aquifers S Kümmel, FA Herbst, A Bahr, M Duarte, DH Pieper, N Jehmlich, J Seifert, ... FEMS microbiology ecology 91 (3), 2015 | 50 | 2015 |
| Global proteome analysis of vancomycin stress in Staphylococcus aureus B Hessling, F Bonn, A Otto, FA Herbst, GM Rappen, J Bernhardt, ... International Journal of Medical Microbiology 303 (8), 624-634, 2013 | 40 | 2013 |
| Metaproteomics: evaluation of protein extraction from activated sludge SH Hansen, A Stensballe, PH Nielsen, FA Herbst Proteomics 14 (21-22), 2535-2539, 2014 | 39 | 2014 |
| Enhancing metaproteomics—the value of models and defined environmental microbial systems FA Herbst, V Lünsmann, H Kjeldal, N Jehmlich, A Tholey, M von Bergen, ... Proteomics 16 (5), 783-798, 2016 | 36 | 2016 |
| MetaProSIP: automated inference of stable isotope incorporation rates in proteins for functional metaproteomics T Sachsenberg, FA Herbst, M Taubert, R Kermer, N Jehmlich, ... Journal of proteome research 14 (2), 619-627, 2014 | 33 | 2014 |
| Microbial interactions during residual oil and n‐fatty acid metabolism by a methanogenic consortium BEL Morris, FA Herbst, F Bastida, J Seifert, M von Bergen, HH Richnow, ... Environmental microbiology reports 4 (3), 297-306, 2012 | 33 | 2012 |
| Major proteomic changes associated with amyloid-induced biofilm formation in Pseudomonas aeruginosa PAO1 FA Herbst, MT Søndergaard, H Kjeldal, A Stensballe, PH Nielsen, ... Journal of proteome research 14 (1), 72-81, 2014 | 24 | 2014 |
| Genome and secretome analyses provide insights into keratin decomposition by novel proteases from the non-pathogenic fungus Onygena corvina Y Huang, PK Busk, FA Herbst, L Lange Applied Microbiology and Biotechnology, 1-15, 2015 | 23 | 2015 |
| Metaproteomics and metabolomics analyses of chronically petroleum‐polluted sites reveal the importance of general anaerobic processes uncoupled with degradation R Bargiela, FA Herbst, M Martínez‐Martínez, J Seifert, D Rojo, S Cappello, ... Proteomics 15 (20), 3508-3520, 2015 | 22 | 2015 |
| A new class of hybrid secretion system is employed in Pseudomonas amyloid biogenesis SL Rouse, WJ Hawthorne, JL Berry, DS Chorev, SA Ionescu, S Lambert, ... Nature communications 8 (1), 263, 2017 | 19 | 2017 |
| Context-specific metabolic network reconstruction of a naphthalene-degrading bacterial community guided by metaproteomic data L Tobalina, R Bargiela, J Pey, FA Herbst, I Lores, D Rojo, C Barbas, ... Bioinformatics 31 (11), 1771-1779, 2015 | 19 | 2015 |
| Sulfur-34S stable isotope labeling of amino acids for quantification (SULAQ34) of proteomic changes in Pseudomonas fluorescens during naphthalene degradation FA Herbst, M Taubert, N Jehmlich, T Behr, F Schmidt, M von Bergen, ... Molecular & Cellular Proteomics 12 (8), 2060-2069, 2013 | 16 | 2013 |
| Sulfur‐36S stable isotope labeling of amino acids for quantification (SULAQ) N Jehmlich, FD Kopinke, S Lenhard, C Vogt, FA Herbst, J Seifert, ... Proteomics 12 (1), 37-42, 2012 | 16 | 2012 |
Martin von BergenHelmholtz Centre for Environmental Research, Prof Systems Microbiology, Aalborg UniversityVerified email at ufz.de
