Aleksey V Zimin
Aleksey V Zimin
Associate Research Scientist, Department of Biomedical Engineering, Johns Hopkins Unviersity
Verified email at jhu.edu - Homepage
TitleCited byYear
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
18142007
A whole-genome assembly of the domestic cow, Bos taurus
AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ...
Genome biology 10 (4), R42, 2009
9542009
A local ensemble Kalman filter for atmospheric data assimilation
E Ott, BR Hunt, I Szunyogh, AV Zimin, EJ Kostelich, M Corazza, E Kalnay, ...
Tellus A: Dynamic Meteorology and Oceanography 56 (5), 415-428, 2004
7962004
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
KK Dasmahapatra, JR Walters, AD Briscoe, JW Davey, A Whibley, ...
Nature 487 (7405), 94, 2012
7852012
GAGE: A critical evaluation of genome assemblies and assembly algorithms
SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ...
Genome research 22 (3), 557-567, 2012
6462012
The MaSuRCA genome assembler
AV Zimin, G Marçais, D Puiu, M Roberts, SL Salzberg, JA Yorke
Bioinformatics 29 (21), 2669-2677, 2013
5152013
The Atlantic salmon genome provides insights into rediploidization
S Lien, BF Koop, SR Sandve, JR Miller, MP Kent, T Nome, TR Hvidsten, ...
Nature 533 (7602), 200, 2016
4002016
Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
RA Dalloul, JA Long, AV Zimin, L Aslam, K Beal, LA Blomberg, P Bouffard, ...
PLoS biology 8 (9), e1000475, 2010
3632010
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
DB Neale, JL Wegrzyn, KA Stevens, AV Zimin, D Puiu, MW Crepeau, ...
Genome biology 15 (3), R59, 2014
3382014
Four‐dimensional ensemble Kalman filtering
BR Hunt, E Kalnay, EJ Kostelich, E Ott, DJ Patil, T Sauer, I Szunyogh, ...
Tellus A 56 (4), 273-277, 2004
2572004
Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile)
CD Smith, A Zimin, C Holt, E Abouheif, R Benton, E Cash, V Croset, ...
Proceedings of the National Academy of Sciences 108 (14), 5673-5678, 2011
2382011
Draft genome of the red harvester ant Pogonomyrmex barbatus
CR Smith, CD Smith, HM Robertson, M Helmkampf, A Zimin, M Yandell, ...
Proceedings of the National Academy of Sciences 108 (14), 5667-5672, 2011
2342011
Sequencing and assembly of the 22-Gb loblolly pine genome
A Zimin, KA Stevens, MW Crepeau, A Holtz-Morris, M Koriabine, ...
Genetics 196 (3), 875-890, 2014
2152014
Unique features of the loblolly pine (Pinus taeda L.) megagenome revealed through sequence annotation
JL Wegrzyn, JD Liechty, KA Stevens, LS Wu, CA Loopstra, ...
Genetics 196 (3), 891-909, 2014
1532014
Genome sequence of the progenitor of the wheat D genome Aegilops tauschii
MC Luo, YQ Gu, D Puiu, H Wang, SO Twardziok, KR Deal, N Huo, T Zhu, ...
Nature 551 (7681), 498, 2017
1442017
The channel catfish genome sequence provides insights into the evolution of scale formation in teleosts
Z Liu, S Liu, J Yao, L Bao, J Zhang, Y Li, C Jiang, L Sun, R Wang, ...
Nature communications 7, 11757, 2016
1392016
Propagation of the effect of targeted observations: The 2000 Winter Storm Reconnaissance Program
I Szunyogh, Z Toth, AV Zimin, SJ Majumdar, A Persson
Monthly weather review 130 (5), 1144-1165, 2002
1272002
MUMmer4: a fast and versatile genome alignment system
G Marçais, AL Delcher, AM Phillippy, R Coston, SL Salzberg, A Zimin
PLoS computational biology 14 (1), e1005944, 2018
1182018
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
AV Zimin, D Puiu, R Hall, S Kingan, BJ Clavijo, SL Salzberg
Gigascience 6 (11), gix097, 2017
1112017
A new chicken genome assembly provides insight into avian genome structure
WC Warren, LDW Hillier, C Tomlinson, P Minx, M Kremitzki, T Graves, ...
G3: Genes, Genomes, Genetics 7 (1), 109-117, 2017
1092017
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Articles 1–20