Hyunmin Kim
Hyunmin Kim
University of Colorado School of Medicine
Verified email at ucdenver.edu
TitleCited byYear
Evidence for an ancient adaptive episode of convergent molecular evolution
TA Castoe, APJ de Koning, HM Kim, W Gu, BP Noonan, G Naylor, ...
Proceedings of the National Academy of Sciences 106 (22), 8986-8991, 2009
2452009
Gene-specific RNA polymerase II phosphorylation and the CTD code
H Kim, B Erickson, W Luo, D Seward, JH Graber, DD Pollock, PC Megee, ...
Nature structural & molecular biology 17 (10), 1279, 2010
2402010
Pre-mRNA splicing is a determinant of histone H3K36 methylation
S Kim, H Kim, N Fong, B Erickson, DL Bentley
Proceedings of the National Academy of Sciences 108 (33), 13564-13569, 2011
1552011
mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription
K Brannan, H Kim, B Erickson, K Glover-Cutter, S Kim, N Fong, L Kiemele, ...
Molecular cell 46 (3), 311-324, 2012
1392012
Pre-mRNA splicing is facilitated by an optimal RNA polymerase II elongation rate
N Fong, H Kim, Y Zhou, X Ji, J Qiu, T Saldi, K Diener, K Jones, XD Fu, ...
Genes & development 28 (23), 2663-2676, 2014
1302014
Intrinsic amino acid side‐chain hydrophilicity/hydrophobicity coefficients determined by reversed‐phase high‐performance liquid chromatography of model peptides: Comparison …
CT Mant, JM Kovacs, HM Kim, DD Pollock, RS Hodges
Peptide Science: Original Research on Biomolecules 92 (6), 573-595, 2009
962009
The export factor Yra1 modulates mRNA 3′ end processing
SA Johnson, H Kim, B Erickson, DL Bentley
Nature structural & molecular biology 18 (10), 1164, 2011
882011
Effects of transcription elongation rate and Xrn2 exonuclease activity on RNA polymerase II termination suggest widespread kinetic competition
N Fong, K Brannan, B Erickson, H Kim, MA Cortazar, RM Sheridan, ...
Molecular cell 60 (2), 256-267, 2015
832015
Evaluation of lexical methods for detecting relationships between concepts from multiple ontologies
HL Johnson, KB Cohen, WA Baumgartner Jr, Z Lu, M Bada, T Kester, ...
Biocomputing 2006, 28-39, 2006
452006
BiNGS! SL-seq: a bioinformatics pipeline for the analysis and interpretation of deep sequencing genome-wide synthetic lethal screen
J Kim, AC Tan
Next Generation Microarray Bioinformatics, 389-398, 2012
332012
Human TFIIH kinase CDK7 regulates transcription-associated chromatin modifications
CC Ebmeier, B Erickson, BL Allen, MA Allen, H Kim, N Fong, JR Jacobsen, ...
Cell reports 20 (5), 1173-1186, 2017
322017
AMPK/FIS1-mediated mitophagy is required for self-renewal of human AML stem cells
S Pei, M Minhajuddin, B Adane, N Khan, BM Stevens, SC Mack, S Lai, ...
Cell Stem Cell 23 (1), 86-100. e6, 2018
312018
A short survey of computational analysis methods in analysing ChIP-seq data
H Kim, J Kim, H Selby, D Gao, T Tong, TL Phang, AC Tan
Human genomics 5 (2), 117, 2011
312011
Resistance to radiotherapy and PD-L1 blockade is mediated by TIM-3 upregulation and regulatory T-cell infiltration
A Oweida, MK Hararah, A Phan, D Binder, S Bhatia, S Lennon, ...
Clinical Cancer Research 24 (21), 5368-5380, 2018
242018
A survey of statistical software for analysing RNA-seq data
D Gao, J Kim, H Kim, TL Phang, H Selby, AC Tan, T Tong
Human genomics 5 (1), 56, 2010
222010
Coordination of RNA polymerase II pausing and 3′ end processing factor recruitment with alternative polyadenylation
B Fusby, S Kim, B Erickson, H Kim, ML Peterson, DL Bentley
Molecular and cellular biology 36 (2), 295-303, 2016
212016
Gene promoters dictate histone occupancy within genes
R Perales, B Erickson, L Zhang, H Kim, E Valiquett, D Bentley
The EMBO journal 32 (19), 2645-2656, 2013
202013
Exploring the molecular mechanisms of Traditional Chinese Medicine components using gene expression signatures and connectivity map
M Yoo, J Shin, H Kim, J Kim, J Kang, AC Tan
Computer methods and programs in biomedicine 174, 33-40, 2019
82019
Systems pharmacology-based approach of connecting disease genes in genome-wide association studies with traditional chinese medicine
J Kim, M Yoo, J Shin, H Kim, J Kang, AC Tan
International journal of genomics 2018, 2018
32018
Mining discriminative distance context of transcription factor binding sites on ChIP enriched regions
H Kim, KJ Kechris, L Hunter
International Symposium on Bioinformatics Research and Applications, 338-349, 2007
32007
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Articles 1–20