Srivatsan Raman
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Improving physical realism, stereochemistry, and side‐chain accuracy in homology modeling: Four approaches that performed well in CASP8
E Krieger, K Joo, J Lee, J Lee, S Raman, J Thompson, M Tyka, D Baker, ...
Proteins: Structure, Function, and Bioinformatics 77 (S9), 114-122, 2009
10432009
Structure prediction for CASP8 with all‐atom refinement using Rosetta
S Raman, R Vernon, J Thompson, M Tyka, R Sadreyev, J Pei, D Kim, ...
Proteins: Structure, Function, and Bioinformatics 77 (S9), 89-99, 2009
4452009
High-resolution structure prediction and the crystallographic phase problem
B Qian, S Raman, R Das, P Bradley, AJ McCoy, RJ Read, D Baker
Nature 450 (7167), 259-264, 2007
3612007
NMR structure determination for larger proteins using backbone-only data
S Raman, OF Lange, P Rossi, M Tyka, X Wang, J Aramini, G Liu, ...
Science 327 (5968), 1014-1018, 2010
2732010
Structure prediction for CASP7 targets using extensive all‐atom refinement with Rosetta@ home
R Das, B Qian, S Raman, R Vernon, J Thompson, P Bradley, S Khare, ...
Proteins: Structure, Function, and Bioinformatics 69 (S8), 118-128, 2007
2552007
Evolution-guided optimization of biosynthetic pathways
S Raman, JK Rogers, ND Taylor, GM Church
Proceedings of the National Academy of Sciences 111 (50), 17803-17808, 2014
2262014
Tracking public and private responses to the COVID-19 epidemic: evidence from state and local government actions
S Gupta, TD Nguyen, FL Rojas, S Raman, B Lee, A Bento, KI Simon, ...
National Bureau of Economic Research, 2020
2052020
Engineering an allosteric transcription factor to respond to new ligands
ND Taylor, AS Garruss, R Moretti, S Chan, MA Arbing, D Cascio, ...
Nature methods 13 (2), 177-183, 2016
1942016
Synthetic biosensors for precise gene control and real-time monitoring of metabolites
JK Rogers, CD Guzman, ND Taylor, S Raman, K Anderson, GM Church
Nucleic acids research 43 (15), 7648-7660, 2015
1672015
CASD-NMR: critical assessment of automated structure determination by NMR
A Rosato, A Bagaria, D Baker, B Bardiaux, A Cavalli, JF Doreleijers, ...
Nature methods 6 (9), 625-626, 2009
662009
Improving NMR protein structure quality by Rosetta refinement: a molecular replacement study
TA Ramelot, S Raman, AP Kuzin, R Xiao, LC Ma, TB Acton, JF Hunt, ...
Proteins: Structure, Function, and Bioinformatics 75 (1), 147-167, 2009
622009
Engineering allostery
S Raman, N Taylor, N Genuth, S Fields, GM Church
Trends in Genetics 30 (12), 521-528, 2014
602014
Accurate automated protein NMR structure determination using unassigned NOESY data
S Raman, YJ Huang, B Mao, P Rossi, JM Aramini, G Liu, GT Montelione, ...
Journal of the American Chemical Society 132 (1), 202-207, 2010
562010
Advances in Rosetta protein structure prediction on massively parallel systems
S Raman, B Qian, D Baker, RC Walker
IBM Journal of Research and Development 52 (1.2), 7-17, 2008
242008
Image pickup and recording apparatus for recording a certain image separately from other image, and an image picking up and recording method
J Iijima
US Patent App. 10/385,333, 2003
202003
Fully automated high-quality NMR structure determination of small 2 H-enriched proteins
Y Tang, WM Schneider, Y Shen, S Raman, M Inouye, D Baker, MJ Roth, ...
Journal of structural and functional genomics 11 (4), 223-232, 2010
172010
Design of a transcriptional biosensor for the portable, on-demand detection of cyanuric acid
X Liu, AD Silverman, KK Alam, E Iverson, JB Lucks, MC Jewett, S Raman
ACS synthetic biology 9 (1), 84-94, 2019
162019
Functional plasticity and evolutionary adaptation of allosteric regulation
M Leander, Y Yuan, A Meger, Q Cui, S Raman
Proceedings of the National Academy of Sciences 117 (41), 25445-25454, 2020
122020
Engineered bacteriophages as programmable biocontrol agents
P Huss, S Raman
Current opinion in biotechnology 61, 116-121, 2020
112020
A regulatory NADH/NAD+ redox biosensor for bacteria
Y Liu, R Landick, S Raman
ACS synthetic biology 8 (2), 264-273, 2019
112019
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