| PROCHECK: a program to check the stereochemical quality of protein structures RA Laskowski, MW MacArthur, DS Moss, JM Thornton Journal of applied crystallography 26 (2), 283-291, 1993 | 24114 | 1993 |
| The rapid generation of mutation data matrices from protein sequences DT Jones, WR Taylor, JM Thornton Bioinformatics 8 (3), 275-282, 1992 | 6375 | 1992 |
| AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR RA Laskowski, JAC Rullmann, MW MacArthur, R Kaptein, JM Thornton Journal of biomolecular NMR 8 (4), 477-486, 1996 | 5148 | 1996 |
| LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions AC Wallace, RA Laskowski, JM Thornton Protein engineering, design and selection 8 (2), 127-134, 1995 | 4855 | 1995 |
| Principles of protein-protein interactions S Jones, JM Thornton Proceedings of the National Academy of Sciences 93 (1), 13-20, 1996 | 3137 | 1996 |
| CATH–a hierarchic classification of protein domain structures CA Orengo, AD Michie, S Jones, DT Jones, MB Swindells, JM Thornton Structure 5 (8), 1093-1109, 1997 | 3091 | 1997 |
| Satisfying hydrogen bonding potential in proteins IK McDonald, JM Thornton Journal of molecular biology 238 (5), 777-793, 1994 | 2276 | 1994 |
| Stereochemical quality of protein structure coordinates AL Morris, MW MacArthur, EG Hutchinson, JM Thornton Proteins: Structure, Function, and Bioinformatics 12 (4), 345-364, 1992 | 1861 | 1992 |
| naccess SJ Hubbard, JM Thornton Computer Program, Department of Biochemistry and Molecular Biology …, 1993 | 1786 | 1993 |
| A new approach to protein fold recognition DT Jones, WR Taylort, JM Thornton Nature 358 (6381), 86-89, 1992 | 1618 | 1992 |
| Main-chain bond lengths and bond angles in protein structures RA Laskowski, DS Moss, JM Thornton Journal of molecular biology 231 (4), 1049-1067, 1993 | 1362 | 1993 |
| Influence of proline residues on protein conformation MW MacArthur, JM Thornton Journal of molecular biology 218 (2), 397-412, 1991 | 1289 | 1991 |
| Helix geometry in proteins DJ Barlow, JM Thornton Journal of molecular biology 201 (3), 601-619, 1988 | 1252 | 1988 |
| PROMOTIF—a program to identify and analyze structural motifs in proteins EG Hutchinson, JM Thornton Protein Science 5 (2), 212-220, 1996 | 1242 | 1996 |
| Antibody-antigen interactions: contact analysis and binding site topography RM MacCallum, ACR Martin, JM Thornton Journal of molecular biology 262 (5), 732-745, 1996 | 1172 | 1996 |
| Analysis and prediction of the different types of β-turn in proteins CM Wilmot, JM Thornton Journal of molecular biology 203 (1), 221-232, 1988 | 1138 | 1988 |
| A revised set of potentials for β‐turn formation in proteins EG Hutchinson, JM Thornton Protein Science 3 (12), 2207-2216, 1994 | 1132 | 1994 |
| Ribosomal protein S6 kinase 1 signaling regulates mammalian life span C Selman, JMA Tullet, D Wieser, E Irvine, SJ Lingard, AI Choudhury, ... Science 326 (5949), 140-144, 2009 | 1059 | 2009 |
| Protein superfamilles and domain superfolds CA Orengo, DT Jones, JM Thornton Nature 372 (6507), 631-634, 1994 | 1018 | 1994 |
| Amino acid–base interactions: a three-dimensional analysis of protein–DNA interactions at an atomic level NM Luscombe, RA Laskowski, JM Thornton Nucleic acids research 29 (13), 2860-2874, 2001 | 1001 | 2001 |
