| Initial sequencing and analysis of the human genome International Human Genome Sequencing Consortium nature 409 (6822), 860, 2001 | 24132 | 2001 |
| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 9236 | 2012 |
| Velvet: algorithms for de novo short read assembly using de Bruijn graphs DR Zerbino, E Birney Genome research 18 (5), 821-829, 2008 | 8403 | 2008 |
| Initial sequencing and comparative analysis of the mouse genome Mouse Genome Sequencing Consortium Nature 420 (6915), 520, 2002 | 6723 | 2002 |
| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium Nature 447 (7146), 799, 2007 | 4866 | 2007 |
| A draft sequence of the Neandertal genome RE Green, J Krause, AW Briggs, T Maricic, U Stenzel, M Kircher, ... science 328 (5979), 710-722, 2010 | 3075 | 2010 |
| Patterns of somatic mutation in human cancer genomes C Greenman, P Stephens, R Smith, GL Dalgliesh, C Hunter, G Bignell, ... Nature 446 (7132), 153, 2007 | 2891 | 2007 |
| Ensembl 2012 P Flicek, MR Amode, D Barrell, K Beal, S Brent, D Carvalho-Silva, ... Nucleic acids research 40 (D1), D84-D90, 2011 | 2800 | 2011 |
| The Pfam protein families database A Bateman, E Birney, L Cerruti, R Durbin, L Etwiller, SR Eddy, ... Nucleic acids research 30 (1), 276-280, 2002 | 2419 | 2002 |
| Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution International Chicken Genome Sequencing Consortium Nature 432 (7018), 695, 2004 | 2225 | 2004 |
| The genome sequence of the malaria mosquito Anopheles gambiae RA Holt, GM Subramanian, A Halpern, GG Sutton, R Charlab, ... science 298 (5591), 129-149, 2002 | 2126 | 2002 |
| Genome sequence of the Brown Norway rat yields insights into mammalian evolution Rat Genome Sequencing Project Consortium Nature 428 (6982), 493, 2004 | 2045 | 2004 |
| Comparative genomics of the eukaryotes GM Rubin, MD Yandell, JR Wortman, GL Gabor, CR Nelson, IK Hariharan, ... Science 287 (5461), 2204-2215, 2000 | 1840 | 2000 |
| Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs Fantom Consortium, ... Nature 420 (6915), 563, 2002 | 1703 | 2002 |
| The Bioperl toolkit: Perl modules for the life sciences JE Stajich, D Block, K Boulez, SE Brenner, SA Chervitz, C Dagdigian, ... Genome research 12 (10), 1611-1618, 2002 | 1702 | 2002 |
| The Ensembl genome database project T Hubbard, D Barker, E Birney, G Cameron, Y Chen, L Clark, T Cox, J Cuff, ... Nucleic acids research 30 (1), 38-41, 2002 | 1523 | 2002 |
| International network of cancer genome projects International Cancer Genome Consortium Nature 464 (7291), 993, 2010 | 1458 | 2010 |
| GeneWise and genomewise E Birney, M Clamp, R Durbin Genome research 14 (5), 988-995, 2004 | 1432 | 2004 |
| The Pfam protein families database A Bateman, E Birney, R Durbin, SR Eddy, KL Howe, ELL Sonnhammer Nucleic acids research 28 (1), 263-266, 2000 | 1409 | 2000 |
| Automated generation of heuristics for biological sequence comparison GSC Slater, E Birney BMC bioinformatics 6 (1), 31, 2005 | 1321 | 2005 |