| VARSCOT: variant-aware detection and scoring enables sensitive and personalized off-target detection for CRISPR-Cas9 LOW Wilson, S Hetzel, C Pockrandt, K Reinert, DC Bauer BMC Biotechnology 19 (1), 40, 2019 | | 2019 |
| ganon: precise metagenomics classification against large and up-to-date sets of reference sequences VC Piro, TH Dadi, E Seiler, K Reinert, BY Renard bioRxiv, 406017, 2019 | | 2019 |
| EPIFANY-A method for efficient high-confidence protein inference J Pfeuffer, T Sachsenberg, TMH Dijkstra, O Serang, K Reinert, ... bioRxiv, 734327, 2019 | | 2019 |
| GenMap: Fast and Exact Computation of Genome Mappability C Pockrandt, M Alzamel, CS Iliopoulos, K Reinert bioRxiv, 611160, 2019 | | 2019 |
| ganon: continuously up-to-date with database growth for precise short read classification in metagenomics VC Piro, TH Dadi, E Seiler, K Reinert, BY Renard bioRxiv, 406017, 2019 | 1 | 2019 |
| DREAM-Yara: an exact read mapper for very large databases with short update time TH Dadi, E Siragusa, VC Piro, A Andrusch, E Seiler, BY Renard, K Reinert Bioinformatics 34 (17), i766-i772, 2018 | 6 | 2018 |
| Generic accelerated sequence alignment in SeqAn using vectorization and multi-threading R Rahn, S Budach, P Costanza, M Ehrhardt, J Hancox, K Reinert Bioinformatics 34 (20), 3437-3445, 2018 | 5 | 2018 |
| The SeqAn C++ template library for efficient sequence analysis: A resource for programmers K Reinert, TH Dadi, M Ehrhardt, H Hauswedell, S Mehringer, R Rahn, ... Journal of biotechnology 261, 157-168, 2017 | 30 | 2017 |
| OpenMS–A platform for reproducible analysis of mass spectrometry data J Pfeuffer, T Sachsenberg, O Alka, M Walzer, A Fillbrunn, L Nilse, ... Journal of biotechnology 261, 142-148, 2017 | 33 | 2017 |
| Optimum Search Schemes for Approximate String Matching Using Bidirectional FM-Index K Kianfar, C Pockrandt, B Torkamandi, H Luo, K Reinert arXiv preprint arXiv:1711.02035, 2017 | | 2017 |
| Flexbar 3.0–SIMD and multicore parallelization JT Roehr, C Dieterich, K Reinert Bioinformatics 33 (18), 2941-2942, 2017 | 25 | 2017 |
| Epr-dictionaries: A practical and fast data structure for constant time searches in unidirectional and bidirectional fm indices C Pockrandt, M Ehrhardt, K Reinert International Conference on Research in Computational Molecular Biology, 190-206, 2017 | 5 | 2017 |
| SLIMM: species level identification of microorganisms from metagenomes TH Dadi, BY Renard, LH Wieler, T Semmler, K Reinert PeerJ 5, e3138, 2017 | 21 | 2017 |
| Development and optimisation of a generic micro LC-ESI-MS method for the qualitative and quantitative determination of 30-mer toxic gliadin peptides in wheat flour for food … B Vatansever, A Muñoz, CL Klein, K Reinert Analytical and bioanalytical chemistry 409 (4), 989-997, 2017 | 2 | 2017 |
| In-depth analysis of protein inference algorithms using multiple search engines and well-defined metrics E Audain, J Uszkoreit, T Sachsenberg, J Pfeuffer, X Liang, H Hermjakob, ... Journal of proteomics 150, 170-182, 2017 | 23 | 2017 |
| Dagstuhl Reports, Vol. 6, No. 8, pp. 91-130: Next Generation Sequencing (Dagstuhl Seminar 16351) G Meyers, M Pop, K Reinert, T Warnow Schloss Dagstuhl--Leibniz-Zentrum fuer Informatik, 2017 | | 2017 |
| Vaquita: Fast and Accurate Identification of Structural Variation Using Combined Evidence J Kim, K Reinert 17th International Workshop on Algorithms in Bioinformatics (WABI 2017), 2017 | 1 | 2017 |
| Next generation sequencing (dagstuhl seminar 16351) G Myers, M Pop, K Reinert, T Warnow Dagstuhl Reports 6 (8), 2017 | 3 | 2017 |
| Alternate-locus aware variant calling in whole genome sequencing M Jäger, M Schubach, T Zemojtel, K Reinert, DM Church, PN Robinson Genome medicine 8 (1), 130, 2016 | 7 | 2016 |
| High‐performance liquid chromatography with electrospray ionization ion mobility spectrometry: Characterization, data management, and applications M Zühlke, D Riebe, T Beitz, HG Löhmannsröben, S Andreotti, K Reinert, ... Journal of separation science 39 (24), 4756-4764, 2016 | 3 | 2016 |
Oliver KohlbacherProfessor for Applied Bioinformatics, University of TübingenDirección de correo verificada de uni-tuebingen.de
