Toby Gibson
TitleCited byYear
An intrinsically disordered proteins community for ELIXIR
NE Davey, MM Babu, M Blackledge, A Bridge, S Capella-Gutierrez, ...
F1000Research 8 (1753), 1753, 2019
2019
CiliaCarta: An integrated and validated compendium of ciliary genes
TJP Van Dam, J Kennedy, R Van Der Lee, E De Vrieze, KA Wunderlich, ...
PloS one 14 (5), e0216705, 2019
52019
Modulation of HIV-1 gene expression by binding of a ULM motif in the Rev protein to UHM-containing splicing factors
M Pabis, L Corsini, M Vincendeau, K Tripsianes, TJ Gibson, ...
Nucleic acids research 47 (9), 4859-4871, 2019
2019
ELM-the eukaryotic linear motif resource in 2020
M Kumar, M Gouw, S Michael, H Sámano-Sánchez, R Pancsa, J Glavina, ...
Nucleic acids research, 2019
2019
PDBe-KB: a community-driven resource for structural and functional annotations
M Varadi, J Berrisford, M Deshpande, SS Nair, A Gutmanas, D Armstrong, ...
Nucleic Acids Research, 2019
22019
Control of mitotic chromosome condensation by the fission yeast transcription factor Zas1
C Schiklenk, B Petrova, M Kschonsak, M Hassler, C Klein, TJ Gibson, ...
The Journal of cell biology 217 (7), 2383-2401, 2018
22018
Short linear motif core and flanking regions modulate retinoblastoma protein binding affinity and specificity
N Palopoli, NS González Foutel, TJ Gibson, LB Chemes
Protein Engineering, Design and Selection 31 (3), 69-77, 2018
62018
Conserved SQ and QS motifs in bacterial effectors suggest pathogen interplay with the ATM kinase family during infection
D Sampietro, H Samano-Sanchez, NE Davey, M Sharan, B Meszaros, ...
bioRxiv, 364117, 2018
2018
CTCF-mediated chromatin loops between promoter and gene body regulate alternative splicing across individuals
M Ruiz-Velasco, M Kumar, MC Lai, P Bhat, AB Solis-Pinson, A Reyes, ...
Cell systems 5 (6), 628-637. e6, 2017
232017
The Gene Ontology of eukaryotic cilia and flagella
P Roncaglia, TJP van Dam, KR Christie, L Nacheva, G Toedt, MA Huynen, ...
Cilia 6 (1), 10, 2017
32017
The eukaryotic linear motif resource–2018 update
M Gouw, S Michael, H Sámano-Sánchez, M Kumar, A Zeke, B Lang, ...
Nucleic acids research 46 (D1), D428-D434, 2017
532017
Intermolecular base stacking mediates RNA-RNA interaction in a crystal structure of the RNA chaperone Hfq
EC Schulz, M Seiler, C Zuliani, F Voigt, V Rybin, V Pogenberg, N Mücke, ...
Scientific reports 7 (1), 9903, 2017
42017
Exploring short linear motifs using the ELM database and tools
M Gouw, H Sámano‐Sánchez, K Van Roey, F Diella, TJ Gibson, H Dinkel
Current protocols in bioinformatics 58 (1), 8.22. 1-8.22. 35, 2017
92017
Metabolic shifts in residual breast cancer drive tumor recurrence
KM Havas, V Milchevskaya, K Radic, A Alladin, E Kafkia, M Garcia, ...
The Journal of clinical investigation 127 (6), 2091-2105, 2017
352017
Degrons in cancer
B Mészáros, M Kumar, TJ Gibson, B Uyar, Z Dosztányi
Science signaling 10 (470), eaak9982, 2017
382017
A Tool to Build Up-To-Date Gene Annotations for Affymetrix Microarrays
V Milchevskaya, G Tödt, TJ Gibson
Genomics and Computational Biology 3 (2), e38-e38, 2017
2017
Towards the gene ontology of the eukaryotic cilia and flagella
P Roncaglia, TJP van Dam, KR Christie, L Nacheva, MA Huynen, ...
F1000Research 5, 2016
12016
An organelle-specific protein landscape identifies novel diseases and molecular mechanisms
K Boldt, J Van Reeuwijk, Q Lu, K Koutroumpas, TMT Nguyen, Y Texier, ...
Nature communications 7, 11491, 2016
962016
Hunting for cis-regulatory elements in proteins
TJ Gibson, M Kumar
Cell systems 2 (2), 68-70, 2016
12016
A systems biology approach towards the prediction of ciliopathy mechanisms
K Koutroumpas, J Van Dam, G Toedt, Q Lu, J Van Reeuwijk, K Boldt, ...
Cilia 4 (1), P88, 2015
2015
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Articles 1–20