| MAC-INMV-SSR: a web application dedicated to genotyping members of Mycobacterium avium complex (MAC) including Mycobacterium avium subsp. paratuberculosis strains T Cochard, M Branger, P Supply, S Sreevatsan, F Biet Infection, Genetics and Evolution 77, 104075, 2020 | | 2020 |
| Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe M Hunt, P Bradley, SG Lapierre, S Heys, M Thomsit, MB Hall, KM Malone, ... Wellcome Open Research 4 (191), 191, 2019 | | 2019 |
| Analysis of Mycobacterium tuberculosis genetic lineages circulating in Riga and Riga region, Latvia, isolated between 2008 and 2012 I Pole, J Trofimova, I Norvaisa, P Supply, G Skenders, A Nodieva, I Ozere, ... Infection, Genetics and Evolution, 104126, 2019 | | 2019 |
| Accuracy of whole-genome sequencing to determine recent tuberculosis transmission: an 11-year population-based study in Hamburg, Germany R Diel, TA Kohl, FP Maurer, M Merker, KM Walter, J Hannemann, ... European Respiratory Journal 54 (5), 2019 | | 2019 |
| From environmental bacteria to obligate pathogen: the study of adaptations enhancing the persistence of tuberculosis bacilli A Allen, W Malaga, C Astarie-Dequeker, A Hassan, C Berrone, F Moreau, ... European Respiratory Journal 54 (suppl 63), 2019 | | 2019 |
| Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues CJ Meehan, GA Goig, TA Kohl, L Verboven, A Dippenaar, M Ezewudo, ... Nature Reviews Microbiology 17 (9), 533-545, 2019 | 14 | 2019 |
| PO 8372 Culture-free approaches for the diagnosis and management of patients with rifampicin resistant tuberculosis: the DIAMA project F Massou, D Affolabi, C Merle, G Abebe, OB Sow, B Diarra, O El Tayeb, ... BMJ Global Health 4 (Suppl 3), A30-A30, 2019 | | 2019 |
| Drug-Resistant Tuberculosis, Lebanon, 2016–2017 S El Achkar, C Demanche, M Osman, R Rafei, MB Ismail, H Yaacoub, ... Emerging infectious diseases 25 (3), 564, 2019 | 1 | 2019 |
| Multidrug-resistant tuberculosis outbreak in South Africa–Authors' reply NA Makhado, M Nchabeleng, P Supply, BC de Jong, E André The Lancet Infectious Diseases 19 (2), 135-136, 2019 | | 2019 |
| Zoonotic tuberculosis in humans assessed by next-generation sequencing: an 18-month nationwide study in Lebanon S El Achkar, C Demanche, M Osman, R Rafei, MB Ismail, C Gaudin, ... European Respiratory Journal, 2019 | | 2019 |
| How well do routine molecular diagnostics detect rifampicin heteroresistance in Mycobacterium tuberculosis? KCS Ng, P Supply, F Cobelens, C Gaudin, J González-Martín, ... bioRxiv, 632851, 2019 | 1 | 2019 |
| Outbreak of multidrug-resistant tuberculosis in South Africa undetected by WHO-endorsed commercial tests: an observational study NA Makhado, E Matabane, M Faccin, C Pinçon, A Jouet, F Boutachkourt, ... The Lancet Infectious Diseases 18 (12), 1350-1359, 2018 | 25 | 2018 |
| Set-up and validation of mycobacterial interspersed repetitive unit-variable number of tandem repeat (MIRU-VNTR) analysis of Mycobacterium tuberculosis using BioNumerics software MK Pedersen, AB Andersen, DB Folkvardsen, EM Rasmussen, ... PloS one 13 (10), e0205336, 2018 | | 2018 |
| Compensatory evolution drives multidrug-resistant tuberculosis in Central Asia M Merker, M Barbier, H Cox, JP Rasigade, S Feuerriegel, TA Kohl, R Diel, ... Elife 7, e38200, 2018 | 13 | 2018 |
| Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing P Supply, Cryptic Consortium | | 2018 |
| Prediction of susceptibility to first-line tuberculosis drugs by DNA sequencing CRyPTIC Consortium and the 100,000 Genomes Project New England Journal of Medicine 379 (15), 1403-1415, 2018 | 37 | 2018 |
| Precision tuberculosis control by genome sequencing: Benefit and challenges of a new standard P Supply EBioMedicine 36, 14-15, 2018 | 1 | 2018 |
| An Outpatient Clinic as a Potential Site of Transmission for an Outbreak of New Delhi Metallo-β-Lactamase–producing Klebsiella pneumoniae Sequence Type 716 … A Heinrichs, MA Argudín, R De Mendonça, A Deplano, S Roisin, ... Clinical infectious diseases 68 (6), 993-1000, 2018 | 2 | 2018 |
| Changing patterns of human migrations shaped the global population structure of Mycobacterium tuberculosis in France M Barbier, O Dumitrescu, C Pichat, G Carret, AS Ronnaux-Baron, ... Scientific reports 8 (1), 5855, 2018 | 1 | 2018 |
| An outpatient clinic as a potential site of transmission for an outbreak of NDM-producing Klebsiella pneumoniae ST716: a study using whole-genome sequencing. A Heinrichs, MA Argudín, R De Mendonça, A Deplano, S Roisin, ... Clinical infectious diseases: an official publication of the Infectious …, 2018 | 3 | 2018 |
