| A human gut microbial gene catalogue established by metagenomic sequencing J Qin, R Li, J Raes, M Arumugam, KS Burgdorf, C Manichanh, T Nielsen, ... nature 464 (7285), 59, 2010 | 7256 | 2010 |
| Enterotypes of the human gut microbiome M Arumugam, J Raes, E Pelletier, D Le Paslier, T Yamada, DR Mende, ... nature 473 (7346), 174, 2011 | 4408 | 2011 |
| Richness of human gut microbiome correlates with metabolic markers E Le Chatelier, T Nielsen, J Qin, E Prifti, F Hildebrand, G Falony, ... Nature 500 (7464), 541, 2013 | 2088 | 2013 |
| Reduced diversity of faecal microbiota in Crohn’s disease revealed by a metagenomic approach C Manichanh, L Rigottier-Gois, E Bonnaud, K Gloux, E Pelletier, ... Gut 55 (2), 205-211, 2006 | 1757 | 2006 |
| The gut microbiota in IBD C Manichanh, N Borruel, F Casellas, F Guarner Nature reviews Gastroenterology & hepatology 9 (10), 599, 2012 | 796 | 2012 |
| An integrated catalog of reference genes in the human gut microbiome J Li, H Jia, X Cai, H Zhong, Q Feng, S Sunagawa, M Arumugam, ... Nature biotechnology 32 (8), 834, 2014 | 778 | 2014 |
| Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes HB Nielsen, M Almeida, AS Juncker, S Rasmussen, J Li, S Sunagawa, ... Nature biotechnology 32 (8), 822, 2014 | 486 | 2014 |
| Reshaping the gut microbiome with bacterial transplantation and antibiotic intake C Manichanh, J Reeder, P Gibert, E Varela, M Llopis, M Antolin, R Guigo, ... Genome research 20 (10), 1411-1419, 2010 | 255 | 2010 |
| A microbial signature for Crohn's disease V Pascal, M Pozuelo, N Borruel, F Casellas, D Campos, A Santiago, ... Gut 66 (5), 813-822, 2017 | 194 | 2017 |
| The role of bacteria in onset and perpetuation of inflammatory bowel disease P Seksik, H Sokol, P Lepage, N Vasquez, C Manichanh, I Mangin, ... Alimentary pharmacology & therapeutics 24, 11-18, 2006 | 190 | 2006 |
| Intestinal microbiota and diet in IBS: causes, consequences, or epiphenomena? M Rajilić-Stojanović, DM Jonkers, A Salonen, K Hanevik, J Raes, ... The American journal of gastroenterology 110 (2), 278, 2015 | 185 | 2015 |
| Storage conditions of intestinal microbiota matter in metagenomic analysis S Cardona, A Eck, M Cassellas, M Gallart, C Alastrue, J Dore, F Azpiroz, ... BMC microbiology 12 (1), 158, 2012 | 161 | 2012 |
| Development of a real-time polymerase chain reaction assay for the diagnosis of human herpesvirus-6 infection and application to bone marrow transplant patients A Gautheret-Dejean, C Manichanh, F Thien-Ah-Koon, AM Fillet, ... Journal of virological methods 100 (1-2), 27-35, 2002 | 154 | 2002 |
| Towards standards for human fecal sample processing in metagenomic studies PI Costea, G Zeller, S Sunagawa, E Pelletier, A Alberti, F Levenez, ... Nature biotechnology 35 (11), 1069, 2017 | 150 | 2017 |
| Colonisation by Faecalibacterium prausnitzii and maintenance of clinical remission in patients with ulcerative colitis E Varela, C Manichanh, M Gallart, A Torrejón, N Borruel, F Casellas, ... Alimentary pharmacology & therapeutics 38 (2), 151-161, 2013 | 150 | 2013 |
| Short-term effect of antibiotics on human gut microbiota S Panda, F Casellas, JL Vivancos, MG Cors, A Santiago, S Cuenca, ... PloS one 9 (4), e95476, 2014 | 149 | 2014 |
| Reduction of butyrate-and methane-producing microorganisms in patients with Irritable Bowel Syndrome M Pozuelo, S Panda, A Santiago, S Mendez, A Accarino, J Santos, ... Scientific reports 5, 12693, 2015 | 99 | 2015 |
| The gut microbiota predispose to the pathophysiology of acute postradiotherapy diarrhea C Manichanh, E Varela, C Martinez, M Antolin, M Llopis, J Doré, J Giralt, ... The American journal of gastroenterology 103 (7), 1754, 2008 | 97 | 2008 |
| A human gut microbial gene catalogue established by metagenomic sequencing MBQ dos Santos, T Sicheritz-Pontén, HB Nielsen, S Brunak, J Qin, R Li, ... Nature 464 (7285), 59, 2010 | 84 | 2010 |
| A comparison of random sequence reads versus 16S rDNA sequences for estimating the biodiversity of a metagenomic library C Manichanh, CE Chapple, L Frangeul, K Gloux, R Guigo, J Dore Nucleic acids research 36 (16), 5180-5188, 2008 | 81 | 2008 |
Harry SokolProfessor of Gastroenterology, St Antoine HospitalVerified email at aphp.fr
