Edward C Holmes - Google Scholar Citations

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Andrew RambautProfessor of Molecular Evolution, University of EdinburghVerified email at ed.ac.uk
Mang ShiThe University of SydneyVerified email at sydney.edu.au
Oliver PybusUniversity of Oxford / Royal Veterinary CollegeVerified email at zoo.ox.ac.uk
Elodie Ghedin, Ph.D.Professor of Biology, New York UniversityVerified email at nyu.edu
Martha NelsonNIHVerified email at mail.nih.gov
Colin ParrishCornell UniversityVerified email at cornell.edu
John-Sebastian EdenResearch Scientist at the Westmead Institute for Medical Research, AustraliaVerified email at sydney.edu.au
Bryan GrenfellKathryn Briger and Sarah Fenton Professor of Ecology and Public Affairs, Princeton UniversityVerified email at princeton.edu
Sebastian DucheneAustralian Research Council DECRA fellow, University of MelbourneVerified email at unimelb.edu.au
Tommy Tsan-Yuk LamThe University of Hong KongVerified email at hku.hk
Jemma L GeogheganMacquarie UniversityVerified email at mq.edu.au
Andrew KitchenAssociate Professor of Anthropology, University of IowaVerified email at uiowa.edu
Jie CuiProfessor at Institut Pasteur of Shanghai, Chinese Academy of SciencesVerified email at ips.ac.cn
Francesca Di GiallonardoPostdoctoral Research Fellow, University of New South WalesVerified email at kirby.unsw.edu.au
Siobain DuffyAssociate Professor, Dept Ecology, Evolution and Natural Resources, Rutgers UniversityVerified email at sebs.rutgers.edu
Etienne Simon-LoriereInstitut PasteurVerified email at pasteur.fr
Cadhla FirthJames Cook UniversityVerified email at jcu.edu.au
Mathieu FourmentUniversity of Technology SydneyVerified email at uts.edu.au
Israel PaganCentro de Biotecnología y Genómica de Plantas (UPM-INIA)Verified email at upm.es
Maia RabaaOxford University Clinical Research Unit, HCMC, VietnamVerified email at oucru.org

Edward C Holmes

University of Sydney

Verified email at sydney.edu.au - Homepage

Evolutionary biology Virology


Title	Cited by	Year
Classification of hepatitis C virus into six major genotypes and a series of subtypes by phylogenetic analysis of the NS-5 region P Simmonds, EC Holmes, TA Cha, SW Chan, F McOmish, B Irvine, ... Journal of general virology 74 (11), 2391-2399, 1993	1731	1993
A metagenomic survey of microbes in honey bee colony collapse disorder DL Cox-Foster, S Conlan, EC Holmes, G Palacios, JD Evans, NA Moran, ... Science 318 (5848), 283-287, 2007	1709	2007
Molecular Evolution: A Phylogenetic Approach RDM Page, EC Holmes Oxford University Press, 1998	1381*	1998
A proposed system for the nomenclature of hepatitis C viral genotypes P Simmonds, A Alberti, HJ Alter, F Bonino, DW Bradley, C Brechot, ... Hepatology 19 (5), 1321-1324, 1994	1246	1994
Rates of evolutionary change in viruses: patterns and determinants S Duffy, LA Shackelton, EC Holmes Nature Reviews Genetics 9 (4), 267, 2008	1056	2008
Unifying the epidemiological and evolutionary dynamics of pathogens BT Grenfell, OG Pybus, JR Gog, JLN Wood, JM Daly, JA Mumford, ... science 303 (5656), 327-332, 2004	1021	2004
New world bats harbor diverse influenza A viruses S Tong, X Zhu, Y Li, M Shi, J Zhang, M Bourgeois, H Yang, X Chen, ... PLoS pathogens 9 (10), e1003657, 2013	984	2013
HIV evolution: CTL escape mutation and reversion after transmission AJ Leslie, KJ Pfafferott, P Chetty, R Draenert, MM Addo, M Feeney, ... Nature medicine 10 (3), 282, 2004	911	2004
The genomic and epidemiological dynamics of human influenza A virus A Rambaut, OG Pybus, MI Nelson, C Viboud, JK Taubenberger, ... Nature 453 (7195), 615, 2008	837	2008
The causes and consequences of HIV evolution A Rambaut, D Posada, KA Crandall, EC Holmes Nature Reviews Genetics 5 (1), 52, 2004	674	2004
Rates of molecular evolution in RNA viruses: a quantitative phylogenetic analysis GM Jenkins, A Rambaut, OG Pybus, EC Holmes Journal of molecular evolution 54 (2), 156-165, 2002	593	2002
The origin, emergence and evolutionary genetics of dengue virus EC Holmes, SS Twiddy Infection, genetics and evolution 3 (1), 19-28, 2003	579	2003
Evolutionary aspects of recombination in RNA viruses M Worobey, EC Holmes Journal of General Virology 80 (10), 2535-2543, 1999	568	1999
Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences EJ Feil, EC Holmes, DE Bessen, MS Chan, NPJ Day, MC Enright, ... Proceedings of the National Academy of Sciences 98 (1), 182-187, 2001	558	2001
Clustered mutations in HIV-1 gag are consistently required for escape from HLA-B27–restricted cytotoxic T lymphocyte responses AD Kelleher, C Long, EC Holmes, RL Allen, J Wilson, C Conlon, ... Journal of Experimental Medicine 193 (3), 375-386, 2001	552	2001
Selection for specific sequences in the external envelope protein of human immunodeficiency virus type 1 upon primary infection. LQ Zhang, P MacKenzie, A Cleland, EC Holmes, AJ Brown, P Simmonds Journal of virology 67 (6), 3345-3356, 1993	545	1993
Comparative genomics reveals insights into avian genome evolution and adaptation G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ... Science 346 (6215), 1311-1320, 2014	538	2014
Analysis of a new hepatitis C virus type and its phylogenetic relationship to existing variants SW Chan, F McOmish, EC Holmes, B Dow, JF Peutherer, E Follett, ... Journal of General Virology 73 (5), 1131-1141, 1992	535	1992
The evolution of epidemic influenza MI Nelson, EC Holmes Nature reviews genetics 8 (3), 196, 2007	515	2007
Sequence variability in the 5′ non-coding region of hepatitis C virus: identification of a new virus type and restrictions on sequence diversity P Simmonds, F McOmish, PL Yap, SW Chan, CK Lin, G Dusheiko, ... Journal of General Virology 74 (4), 661-668, 1993	513	1993

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